Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Argininosuccinate lyase

Gene

argH

Organism
Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

2-(N(omega)-L-arginino)succinate = fumarate + L-arginine.UniRule annotation

Pathwayi: L-arginine biosynthesis

This protein is involved in step 3 of the subpathway that synthesizes L-arginine from L-ornithine and carbamoyl phosphate.UniRule annotation
Proteins known to be involved in the 3 steps of the subpathway in this organism are:
  1. Ornithine carbamoyltransferase (argF)
  2. Argininosuccinate synthase (argG)
  3. Argininosuccinate lyase (argH)
This subpathway is part of the pathway L-arginine biosynthesis, which is itself part of Amino-acid biosynthesis.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes L-arginine from L-ornithine and carbamoyl phosphate, the pathway L-arginine biosynthesis and in Amino-acid biosynthesis.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Lyase

Keywords - Biological processi

Amino-acid biosynthesis, Arginine biosynthesis

Enzyme and pathway databases

UniPathwayiUPA00068; UER00114.

Names & Taxonomyi

Protein namesi
Recommended name:
Argininosuccinate lyaseUniRule annotation (EC:4.3.2.1UniRule annotation)
Short name:
ASALUniRule annotation
Alternative name(s):
ArginosuccinaseUniRule annotation
Gene namesi
Name:argHUniRule annotation
Ordered Locus Names:Cgl1401, cg1588
OrganismiCorynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
Taxonomic identifieri196627 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesCorynebacteriaceaeCorynebacterium
Proteomesi
  • UP000000582 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 477477Argininosuccinate lyasePRO_0000137764Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi196627.cg1588.

Structurei

3D structure databases

ProteinModelPortaliO88101.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the lyase 1 family. Argininosuccinate lyase subfamily.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CH7. Bacteria.
COG0165. LUCA.
HOGENOMiHOG000242744.
KOiK01755.
OMAiAHHLMAY.
OrthoDBiEOG6P5ZF8.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
HAMAPiMF_00006. Arg_succ_lyase.
InterProiIPR029419. Arg_succ_lyase_C.
IPR009049. Argininosuccinate_lyase.
IPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PTHR11444:SF3. PTHR11444:SF3. 1 hit.
PfamiPF14698. ASL_C2. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00838. argH. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O88101-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEQHGTNEGA LWGGRFSGGP SEAMFALSVS THFDWVLAPY DVLASKAHAK
60 70 80 90 100
VLHQADLLSD EDLATMLAGL DQLGKDVADG TFGPLPSDED VHGAMERGLI
110 120 130 140 150
DRVGPEVGGR LRAGRSRNDQ VATLFRMWVR DAVRDIALGT TELVDALSAQ
160 170 180 190 200
AKAHAGAIMP GKTHFQAAQP VLLAHQLLAH AQPLLRDIDR IRDLDKRLAV
210 220 230 240 250
SPYGSGALAG SSLKLNPEAI AEELGFDSAA DNSIDATSSR DFASETAFVL
260 270 280 290 300
AQLAVDMSRL AEEIIAWCTP EFGYITLSDS WSTGSSIMPQ KKNPDVAELT
310 320 330 340 350
RGKSGRLIGN LTGLLATLKA QPLAYNRDLQ EDKEPIVDSV AQLNLLLPAM
360 370 380 390 400
TGLVSTLTFN TERMRELAPA GFTLATDLAE WMVRQGVPFR EAHEASGACV
410 420 430 440 450
RIAESRGVDL IDLTDEELSG VDARLTPEVR EVLTIDGAVA SRATRGGTAG
460 470
VRVAEQRARV DAASTAHAEW ARAGVRR
Length:477
Mass (Da):51,042
Last modified:August 13, 2002 - v2
Checksum:i06364CA7FEE80E9B
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti10 – 134ALWG → GCGP in AAC24811 (Ref. 1) Curated
Sequence conflicti10 – 134ALWG → GCGP in AAC24819 (Ref. 1) Curated
Sequence conflicti41 – 6626DVLAS…DLATM → HLHAPRAHTMVLFRAGLLTE EQRDGL in AAC24819 (Ref. 1) CuratedAdd
BLAST
Sequence conflicti72 – 754QLGK → SLAQ in AAC24811 (Ref. 1) Curated
Sequence conflicti72 – 754QLGK → SLAQ in AAC24819 (Ref. 1) Curated
Sequence conflicti81 – 811T → S in AAC24811 (Ref. 1) Curated
Sequence conflicti81 – 811T → S in AAC24819 (Ref. 1) Curated
Sequence conflicti86 – 872PS → VT in AAC24811 (Ref. 1) Curated
Sequence conflicti86 – 872PS → VT in AAC24819 (Ref. 1) Curated
Sequence conflicti93 – 953GAM → AAL in AAC24811 (Ref. 1) Curated
Sequence conflicti93 – 953GAM → AAL in AAC24819 (Ref. 1) Curated
Sequence conflicti152 – 1521K → E in AAC24811 (Ref. 1) Curated
Sequence conflicti152 – 1521K → E in AAC24819 (Ref. 1) Curated
Sequence conflicti214 – 2141K → E in AAC24811 (Ref. 1) Curated
Sequence conflicti214 – 2141K → E in AAC24819 (Ref. 1) Curated
Sequence conflicti299 – 2991L → Q in AAC24811 (Ref. 1) Curated
Sequence conflicti299 – 2991L → Q in AAC24819 (Ref. 1) Curated
Sequence conflicti302 – 3021G → R in AAC24811 (Ref. 1) Curated
Sequence conflicti302 – 3021G → R in AAC24819 (Ref. 1) Curated
Sequence conflicti305 – 3051G → R in AAC24811 (Ref. 1) Curated
Sequence conflicti305 – 3051G → R in AAC24819 (Ref. 1) Curated
Sequence conflicti308 – 3081I → L in AAC24811 (Ref. 1) Curated
Sequence conflicti308 – 3081I → L in AAC24819 (Ref. 1) Curated
Sequence conflicti315 – 3151L → V in AAC24811 (Ref. 1) Curated
Sequence conflicti315 – 3151L → V in AAC24819 (Ref. 1) Curated
Sequence conflicti319 – 3213KAQ → EAH in AAC24811 (Ref. 1) Curated
Sequence conflicti319 – 3213KAQ → EAH in AAC24819 (Ref. 1) Curated
Sequence conflicti326 – 3283NRD → SRV in AAC24811 (Ref. 1) Curated
Sequence conflicti326 – 3283NRD → SRV in AAC24819 (Ref. 1) Curated
Sequence conflicti337 – 3371V → L in AAC24811 (Ref. 1) Curated
Sequence conflicti337 – 3371V → L in AAC24819 (Ref. 1) Curated
Sequence conflicti340 – 3401V → L in AAC24811 (Ref. 1) Curated
Sequence conflicti340 – 3401V → L in AAC24819 (Ref. 1) Curated
Sequence conflicti361 – 3699TERMRELAP → DQPDADLDR in AAC24811 (Ref. 1) Curated
Sequence conflicti361 – 3699TERMRELAP → DQPDADLDR in AAC24819 (Ref. 1) Curated
Sequence conflicti375 – 3751A → P in AAC24811 (Ref. 1) Curated
Sequence conflicti375 – 3751A → P in AAC24819 (Ref. 1) Curated
Sequence conflicti379 – 39012AEWMV…GVPFR → RERDRQGGSNSG in AAC24811 (Ref. 1) CuratedAdd
BLAST
Sequence conflicti379 – 39012AEWMV…GVPFR → RERDRQGGSNSG in AAC24819 (Ref. 1) CuratedAdd
BLAST
Sequence conflicti396 – 41924SGACV…DEELS → PARSGGSCGPSPGSGPYRSH RRRTR in AAC24811 (Ref. 1) CuratedAdd
BLAST
Sequence conflicti396 – 41924SGACV…DEELS → PARSGGSCGPSPGSGPYRSH RRRTR in AAC24819 (Ref. 1) CuratedAdd
BLAST
Sequence conflicti425 – 46541LTPEV…DAAST → PDPRGTGSAHHSWCSGFPSN RRWNRARAGCGATRTCRCRK Y in AAC24811 (Ref. 1) CuratedAdd
BLAST
Sequence conflicti425 – 46541LTPEV…DAAST → PDPRGTGSAHHSWCSGFPSN RRWNRARAGCGATRTCRCRK Y in AAC24819 (Ref. 1) CuratedAdd
BLAST

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF048764 Genomic DNA. Translation: AAC24811.1.
AF049897 Genomic DNA. Translation: AAC24819.1.
BA000036 Genomic DNA. Translation: BAB98794.1.
BX927152 Genomic DNA. Translation: CAF21412.1.
RefSeqiNP_600620.1. NC_003450.3.
WP_011014337.1. NC_006958.1.

Genome annotation databases

EnsemblBacteriaiBAB98794; BAB98794; BAB98794.
CAF21412; CAF21412; cg1588.
GeneIDi1019377.
KEGGicgb:cg1588.
cgl:NCgl1347.
PATRICi21494841. VBICorGlu203724_1370.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF048764 Genomic DNA. Translation: AAC24811.1.
AF049897 Genomic DNA. Translation: AAC24819.1.
BA000036 Genomic DNA. Translation: BAB98794.1.
BX927152 Genomic DNA. Translation: CAF21412.1.
RefSeqiNP_600620.1. NC_003450.3.
WP_011014337.1. NC_006958.1.

3D structure databases

ProteinModelPortaliO88101.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi196627.cg1588.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB98794; BAB98794; BAB98794.
CAF21412; CAF21412; cg1588.
GeneIDi1019377.
KEGGicgb:cg1588.
cgl:NCgl1347.
PATRICi21494841. VBICorGlu203724_1370.

Phylogenomic databases

eggNOGiENOG4105CH7. Bacteria.
COG0165. LUCA.
HOGENOMiHOG000242744.
KOiK01755.
OMAiAHHLMAY.
OrthoDBiEOG6P5ZF8.

Enzyme and pathway databases

UniPathwayiUPA00068; UER00114.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
HAMAPiMF_00006. Arg_succ_lyase.
InterProiIPR029419. Arg_succ_lyase_C.
IPR009049. Argininosuccinate_lyase.
IPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PTHR11444:SF3. PTHR11444:SF3. 1 hit.
PfamiPF14698. ASL_C2. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00838. argH. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Molecular cloning of the arginine biosynthetic genes from Corynebacterium glutamicum."
    Park M.Y., Chun J.Y., Ko S.-Y., Lee M.-S.
    Submitted (FEB-1998) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 13059 / LMG 3658 / NCIB 10332 / AS019 / 613.
  2. "The Corynebacterium glutamicum genome: features and impacts on biotechnological processes."
    Ikeda M., Nakagawa S.
    Appl. Microbiol. Biotechnol. 62:99-109(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025.

Entry informationi

Entry nameiARLY_CORGL
AccessioniPrimary (citable) accession number: O88101
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: August 13, 2002
Last modified: November 11, 2015
This is version 117 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.