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Protein
Submitted name:

Putative transcriptional regulator

Gene

SCO1616

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi54 – 73H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative transcriptional regulatorImported
Gene namesi
Ordered Locus Names:SCO1616Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO1616.

Structurei

3D structure databases

ProteinModelPortaliO88073.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini37 – 94HTH lysR-typeInterPro annotationAdd BLAST58

Phylogenomic databases

eggNOGiENOG4107W24. Bacteria.
COG0583. LUCA.
HOGENOMiHOG000233518.
InParanoidiO88073.
OMAiHDFTFIW.
OrthoDBiPOG091H031C.
PhylomeDBiO88073.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiView protein in PROSITE
PS50931. HTH_LYSR. 1 hit.

Sequencei

Sequence statusi: Complete.

O88073-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGSGAGSSTN GGTGGGTEGG HDTRARQVAG SLAHRVPDLG AMELLLAVAR
60 70 80 90 100
LGSLGGAARE LGITQPAASS RIRSMERQLG VALVDRSPRG SRLTDAGALV
110 120 130 140 150
TDWARRIVEA AEAFDAGAQA LRDRRDSRLR VAASMTIAEY LLPGWLVALR
160 170 180 190 200
AQLPDTAVSL LAGNSAAVAE RLLADDADLG FVEGVSVPTG LDSAVIGHDR
210 220 230 240 250
LIVVTAPGHP WARRRRPLEA AELAATPLIL REKGSGTRQV LDAALGGLAR
260 270 280 290 300
PLIELSSTTA VKAAAVGGAG PSVLSELAVG EELTTRRLVS VPVADVVLAR
310 320
DLRAVWPTGH RPTGPARQLL SLTRA
Length:325
Mass (Da):33,489
Last modified:November 1, 1998 - v1
Checksum:iE864048EDBDC2AE5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939109 Genomic DNA. Translation: CAA20827.1.
PIRiT36851.
RefSeqiNP_625892.1. NC_003888.3.
WP_003977210.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA20827; CAA20827; CAA20827.
GeneIDi1097047.
29660463.
KEGGisco:SCO1616.
PATRICifig|100226.15.peg.1630.

Similar proteinsi

Entry informationi

Entry nameiO88073_STRCO
AccessioniPrimary (citable) accession number: O88073
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: September 27, 2017
This is version 98 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported