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Protein
Submitted name:

Putative transcriptional regulator

Gene

SCO1616

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi54 – 73H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative transcriptional regulatorImported
Gene namesi
Ordered Locus Names:SCO1616Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO1616

Structurei

3D structure databases

ProteinModelPortaliO88073
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini37 – 94HTH lysR-typeInterPro annotationAdd BLAST58

Phylogenomic databases

eggNOGiENOG4107W24 Bacteria
COG0583 LUCA
HOGENOMiHOG000233518
InParanoidiO88073
OMAiHYEIDLG
OrthoDBiPOG091H031C
PhylomeDBiO88073

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR005119 LysR_subst-bd
IPR000847 Tscrpt_reg_HTH_LysR
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00126 HTH_1, 1 hit
PF03466 LysR_substrate, 1 hit
PRINTSiPR00039 HTHLYSR
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS50931 HTH_LYSR, 1 hit

Sequencei

Sequence statusi: Complete.

O88073-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGSGAGSSTN GGTGGGTEGG HDTRARQVAG SLAHRVPDLG AMELLLAVAR
60 70 80 90 100
LGSLGGAARE LGITQPAASS RIRSMERQLG VALVDRSPRG SRLTDAGALV
110 120 130 140 150
TDWARRIVEA AEAFDAGAQA LRDRRDSRLR VAASMTIAEY LLPGWLVALR
160 170 180 190 200
AQLPDTAVSL LAGNSAAVAE RLLADDADLG FVEGVSVPTG LDSAVIGHDR
210 220 230 240 250
LIVVTAPGHP WARRRRPLEA AELAATPLIL REKGSGTRQV LDAALGGLAR
260 270 280 290 300
PLIELSSTTA VKAAAVGGAG PSVLSELAVG EELTTRRLVS VPVADVVLAR
310 320
DLRAVWPTGH RPTGPARQLL SLTRA
Length:325
Mass (Da):33,489
Last modified:November 1, 1998 - v1
Checksum:iE864048EDBDC2AE5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939109 Genomic DNA Translation: CAA20827.1
PIRiT36851
RefSeqiNP_625892.1, NC_003888.3
WP_003977210.1, NC_003888.3

Genome annotation databases

EnsemblBacteriaiCAA20827; CAA20827; CAA20827
GeneIDi1097047
KEGGisco:SCO1616
PATRICifig|100226.15.peg.1630

Similar proteinsi

Entry informationi

Entry nameiO88073_STRCO
AccessioniPrimary (citable) accession number: O88073
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: May 23, 2018
This is version 102 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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