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Protein

50S ribosomal protein L35

Gene

rpmI

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L35UniRule annotation
Gene namesi
Name:rpmIUniRule annotation
Ordered Locus Names:SCO1599
ORF Names:SCI35.21c
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001774301 – 6450S ribosomal protein L35Add BLAST64

Proteomic databases

PRIDEiO88059.

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO1599.

Structurei

3D structure databases

ProteinModelPortaliO88059.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L35P family.UniRule annotation

Phylogenomic databases

eggNOGiENOG41084BS. Bacteria.
COG0291. LUCA.
HOGENOMiHOG000040108.
InParanoidiO88059.
KOiK02916.
OMAiNKSHSGA.
OrthoDBiPOG091H00BL.
PhylomeDBiO88059.

Family and domain databases

HAMAPiMF_00514. Ribosomal_L35. 1 hit.
InterProiIPR021137. Ribosomal_L35.
IPR018265. Ribosomal_L35_CS.
IPR001706. Ribosomal_L35_non-mt.
[Graphical view]
PfamiPF01632. Ribosomal_L35p. 1 hit.
[Graphical view]
PRINTSiPR00064. RIBOSOMALL35.
TIGRFAMsiTIGR00001. rpmI_bact. 1 hit.
PROSITEiPS00936. RIBOSOMAL_L35. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O88059-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPKNKSHSGA SKRFKITGSG KVLRERAGKR HLLEHKSSRV TRRLTGNAEM
60
APGDAAKIKK LLGK
Length:64
Mass (Da):7,022
Last modified:November 1, 1998 - v1
Checksum:i680B468EC08D0634
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939109 Genomic DNA. Translation: CAA20810.1.
PIRiT36834.
RefSeqiNP_625875.1. NC_003888.3.
WP_003977225.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA20810; CAA20810; CAA20810.
GeneIDi1097030.
27733015.
KEGGisco:SCO1599.
PATRICi23732794. VBIStrCoe124346_1611.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939109 Genomic DNA. Translation: CAA20810.1.
PIRiT36834.
RefSeqiNP_625875.1. NC_003888.3.
WP_003977225.1. NC_003888.3.

3D structure databases

ProteinModelPortaliO88059.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO1599.

Proteomic databases

PRIDEiO88059.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAA20810; CAA20810; CAA20810.
GeneIDi1097030.
27733015.
KEGGisco:SCO1599.
PATRICi23732794. VBIStrCoe124346_1611.

Phylogenomic databases

eggNOGiENOG41084BS. Bacteria.
COG0291. LUCA.
HOGENOMiHOG000040108.
InParanoidiO88059.
KOiK02916.
OMAiNKSHSGA.
OrthoDBiPOG091H00BL.
PhylomeDBiO88059.

Family and domain databases

HAMAPiMF_00514. Ribosomal_L35. 1 hit.
InterProiIPR021137. Ribosomal_L35.
IPR018265. Ribosomal_L35_CS.
IPR001706. Ribosomal_L35_non-mt.
[Graphical view]
PfamiPF01632. Ribosomal_L35p. 1 hit.
[Graphical view]
PRINTSiPR00064. RIBOSOMALL35.
TIGRFAMsiTIGR00001. rpmI_bact. 1 hit.
PROSITEiPS00936. RIBOSOMAL_L35. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRL35_STRCO
AccessioniPrimary (citable) accession number: O88059
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: November 1, 1998
Last modified: November 2, 2016
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.