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Protein
Submitted name:

Putative transcriptional regulator

Gene

SCO6664

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative transcriptional regulatorImported
Gene namesi
Ordered Locus Names:SCO6664Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO6664.

Structurei

3D structure databases

ProteinModelPortaliO88020.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini197 – 299HTH araC/xylS-type DNA-bindingInterPro annotationAdd BLAST103

Phylogenomic databases

eggNOGiENOG4108U48. Bacteria.
COG2207. LUCA.
HOGENOMiHOG000268707.
InParanoidiO88020.
OMAiMIDFAEY.
OrthoDBiPOG091H0DQQ.
PhylomeDBiO88020.

Family and domain databases

Gene3Di1.10.10.60. 2 hits.
2.60.120.280. 1 hit.
InterProiIPR003313. AraC-bd.
IPR009057. Homeodomain-like.
IPR018060. HTH_AraC.
[Graphical view]
PfamiPF02311. AraC_binding. 1 hit.
PF12833. HTH_18. 1 hit.
[Graphical view]
SMARTiSM00342. HTH_ARAC. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF51215. SSF51215. 1 hit.
PROSITEiPS01124. HTH_ARAC_FAMILY_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O88020-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADERSQDGG DGIRTFPFPV DLSLLGVGMQ VGPMGDGRTW HAQAPLHRVH
60 70 80 90 100
RIDFHIVMLF TGGPVRHMID FAEYEASAGD LLWIRPGQVH RFAPEGEYRG
110 120 130 140 150
TVLTMQPGFL PRATVEATGL YRYDLPPLLH PDEARLAGLT AALEQLRREY
160 170 180 190 200
EDATTLPLSL HTAVLRHTLS AFLLRLAHLA AGSARAARQG RAEAPGDSTF
210 220 230 240 250
VLFRDAVERG FATNHSVSAY ADALGYSRRT LVRAVRAATG ETPKGFIDKR
260 270 280 290 300
VVLEAKRLLA HTEMPIGRVG AAVGFPDAAN FSKFFQQHTD QTPAAFRAEL

R
Length:301
Mass (Da):33,059
Last modified:November 1, 1998 - v1
Checksum:i4ABA0B4624CD6E1C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939128 Genomic DNA. Translation: CAA19943.1.
PIRiT35163.
RefSeqiNP_630739.1. NC_003888.3.
WP_011031087.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA19943; CAA19943; CAA19943.
GeneIDi1102103.
KEGGisco:SCO6664.
PATRICi23743249. VBIStrCoe124346_6770.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939128 Genomic DNA. Translation: CAA19943.1.
PIRiT35163.
RefSeqiNP_630739.1. NC_003888.3.
WP_011031087.1. NC_003888.3.

3D structure databases

ProteinModelPortaliO88020.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO6664.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAA19943; CAA19943; CAA19943.
GeneIDi1102103.
KEGGisco:SCO6664.
PATRICi23743249. VBIStrCoe124346_6770.

Phylogenomic databases

eggNOGiENOG4108U48. Bacteria.
COG2207. LUCA.
HOGENOMiHOG000268707.
InParanoidiO88020.
OMAiMIDFAEY.
OrthoDBiPOG091H0DQQ.
PhylomeDBiO88020.

Family and domain databases

Gene3Di1.10.10.60. 2 hits.
2.60.120.280. 1 hit.
InterProiIPR003313. AraC-bd.
IPR009057. Homeodomain-like.
IPR018060. HTH_AraC.
[Graphical view]
PfamiPF02311. AraC_binding. 1 hit.
PF12833. HTH_18. 1 hit.
[Graphical view]
SMARTiSM00342. HTH_ARAC. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF51215. SSF51215. 1 hit.
PROSITEiPS01124. HTH_ARAC_FAMILY_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO88020_STRCO
AccessioniPrimary (citable) accession number: O88020
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: September 7, 2016
This is version 108 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.