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Protein

Transcriptional regulatory protein TdiR

Gene

tdiR

Organism
Thauera aromatica
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Member of the two-component regulatory system TdiR/TdiS, which probably regulates transcription of toluene catabolic genes (bss operon). Binds to DNA.1 Publication

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi165 – 184H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation, Two-component regulatory system

Names & Taxonomyi

Protein namesi
Recommended name:
Transcriptional regulatory protein TdiR
Gene namesi
Name:tdiR
OrganismiThauera aromatica
Taxonomic identifieri59405 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaRhodocyclalesZoogloeaceaeThauera

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004188711 – 227Transcriptional regulatory protein TdiRAdd BLAST227

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei604-aspartylphosphatePROSITE-ProRule annotation1

Post-translational modificationi

Phosphorylated by TdiS.By similarity

Keywords - PTMi

Phosphoprotein

Structurei

3D structure databases

ProteinModelPortaliO87940.
SMRiO87940.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 125Response regulatoryPROSITE-ProRule annotationAdd BLAST115
Domaini141 – 206HTH luxR-typePROSITE-ProRule annotationAdd BLAST66

Family and domain databases

CDDicd06170. LuxR_C_like. 1 hit.
cd00156. REC. 1 hit.
Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR011006. CheY-like_superfamily.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF00196. GerE. 1 hit.
PF00072. Response_reg. 1 hit.
PRINTSiPR00038. HTHLUXR.
SMARTiView protein in SMART
SM00421. HTH_LUXR. 1 hit.
SM00448. REC. 1 hit.
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF52172. SSF52172. 1 hit.
PROSITEiView protein in PROSITE
PS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.

Sequencei

Sequence statusi: Complete.

O87940-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQATKTGNAS TVFVVDDEAS VRDSLTWLLN SISLDVRTFE SAKDFLDADI
60 70 80 90 100
SCTHGCVVLD VRMQNVSGLQ LQQALSERGF KLPIIFLSAY GDAQMGAQAV
110 120 130 140 150
KKGAFDFLQK PYRNQDLLDA VNAALALNRE MADKQNEKQK HLDLLATLSQ
160 170 180 190 200
REMEILDKVV AGSSSKEIAK LLGISYKTVE AHRGRIISKL GLKSTGDLMH
210 220
FVMRGSSHCS DCGRQPLPGS SPCRPAA
Length:227
Mass (Da):24,759
Last modified:November 1, 1998 - v1
Checksum:iE741F397A850D807
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ001848 Genomic DNA. Translation: CAA05049.1.

Similar proteinsi

Entry informationi

Entry nameiTDIR_THAAR
AccessioniPrimary (citable) accession number: O87940
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 5, 2012
Last sequence update: November 1, 1998
Last modified: August 30, 2017
This is version 91 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program