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Protein
Submitted name:

Putative transporter AmrB

Gene

amrB

Organism
Burkholderia pseudomallei (Pseudomonas pseudomallei)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Protein family/group databases

TCDBi2.A.6.2.24. the resistance-nodulation-cell division (rnd) superfamily.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative transporter AmrBImported
Gene namesi
Name:amrBImported
OrganismiBurkholderia pseudomallei (Pseudomonas pseudomallei)Imported
Taxonomic identifieri28450 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderiapseudomallei group

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei339 – 357HelicalSequence analysisAdd BLAST19
Transmembranei369 – 389HelicalSequence analysisAdd BLAST21
Transmembranei395 – 415HelicalSequence analysisAdd BLAST21
Transmembranei436 – 457HelicalSequence analysisAdd BLAST22
Transmembranei469 – 496HelicalSequence analysisAdd BLAST28
Transmembranei536 – 553HelicalSequence analysisAdd BLAST18
Transmembranei867 – 886HelicalSequence analysisAdd BLAST20
Transmembranei893 – 913HelicalSequence analysisAdd BLAST21
Transmembranei919 – 943HelicalSequence analysisAdd BLAST25
Transmembranei968 – 988HelicalSequence analysisAdd BLAST21
Transmembranei994 – 1022HelicalSequence analysisAdd BLAST29

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi272560.BPSL1803.

Structurei

3D structure databases

ProteinModelPortaliO87936.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. [View classification]SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105BZS. Bacteria.
COG0841. LUCA.

Family and domain databases

Gene3Di3.30.2090.10. 2 hits.
InterProiIPR027463. AcrB_DN_DC_subdom.
IPR001036. Acrflvin-R.
IPR004764. HAE1.
[Graphical view]
PfamiPF00873. ACR_tran. 1 hit.
[Graphical view]
PRINTSiPR00702. ACRIFLAVINRP.
SUPFAMiSSF82714. SSF82714. 2 hits.
TIGRFAMsiTIGR00915. 2A0602. 1 hit.

Sequencei

Sequence statusi: Complete.

O87936-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARFFIDRPV FAWVISLFIM LGGIFAIRAL PVAQYPDIAP PVVSLYATYP
60 70 80 90 100
GASAQVVEES VTAVIEREMN GVPGLLYTSA TSSAGQASLS LTFKQGVSAD
110 120 130 140 150
LAAVDVQNRL KIVEARLPEP VRRDGISIEK AADNAQIIVS LTSEDGRISG
160 170 180 190 200
VELGEYASAN VLQALRRVEG VGKVQFWGAE YAMRIWPDPV KMAALGLTAS
210 220 230 240 250
DIASAVRAHN ARVTIGDVGR SAVPDSAPIA ATVLADAPLT TPDAFGAIAL
260 270 280 290 300
RARADGSTLY LRDVARIEFG GNDYNYPSFV NGKTATGMGI KLAPGSNAVA
310 320 330 340 350
TEKRVRATME ELAKFFPPGV KYQIPYETAS FVRVSMSKVV TTLVEAGVLV
360 370 380 390 400
FAVMFLFMQN FRATLIPTLV VPVALLGTFG AMLAAGFSIN VLTMFGMVLA
410 420 430 440 450
IGILVDDAIV VVENVERLMV EEKLPPYEAT VKAMKQISGA IVGITVVLTS
460 470 480 490 500
VFVPMAFFGG AVGNIYRQFA FALAVSIGFS AFLALSLTPA LCATLLKPVA
510 520 530 540 550
DDHHEKDGFF GWFNRFVARS THRYTRRVGR VLERPLRWLV VYGALTAAAA
560 570 580 590 600
LLITKLPAAF LPDEDQGNFM VMVIRPQGTP LAETMQSVRR VEEYVRTHSP
610 620 630 640 650
SAYTFALGGY NLYGEGPNGG MIFVTMKDWK ERKRARDQVQ AIIAEINAHF
660 670 680 690 700
AGTPNTMVFA INMPALPDLG LTGGFDFRLQ DRGGLGYGAF VAAREKLLAE
710 720 730 740 750
GRKDPVLTDL MFAGTQDAPQ LKLDIDRAKA SALGVSMEEI NATLAVMFGS
760 770 780 790 800
DYIGDFMHGS QVRRVIVQAD GRHRLDAADV TKLRVRNAKG EMVPLAAFAT
810 820 830 840 850
LHWTMGPPQL TRYNGFPSFT INGAASAGHS SGEAMAAIER IASTLPAGTG
860 870 880 890 900
YAWSGQSYEE RLSGAQAPML FALSVLVVFL ALAALYESWS IPFAVMLVVP
910 920 930 940 950
LGVIGAVAGV TLRGMPNDIY FKVGLIATIG LSAKNAILIV EVAKDLVAQR
960 970 980 990 1000
MSLADAALEA ARLRLRPIVM TSLAFGVGVL PLAFATGAAS GAQIAIGTGV
1010 1020 1030 1040
LGGVISATLF AIFLVPLFFV CVGRVFDVVP RRPGGAQAAL EAK
Length:1,043
Mass (Da):111,217
Last modified:November 1, 1998 - v1
Checksum:iB9B17AB968D78022
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF072887 Genomic DNA. Translation: AAC27754.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF072887 Genomic DNA. Translation: AAC27754.1.

3D structure databases

ProteinModelPortaliO87936.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272560.BPSL1803.

Protein family/group databases

TCDBi2.A.6.2.24. the resistance-nodulation-cell division (rnd) superfamily.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiENOG4105BZS. Bacteria.
COG0841. LUCA.

Family and domain databases

Gene3Di3.30.2090.10. 2 hits.
InterProiIPR027463. AcrB_DN_DC_subdom.
IPR001036. Acrflvin-R.
IPR004764. HAE1.
[Graphical view]
PfamiPF00873. ACR_tran. 1 hit.
[Graphical view]
PRINTSiPR00702. ACRIFLAVINRP.
SUPFAMiSSF82714. SSF82714. 2 hits.
TIGRFAMsiTIGR00915. 2A0602. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiO87936_BURPE
AccessioniPrimary (citable) accession number: O87936
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: November 30, 2016
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.