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Protein
Submitted name:

Putative transcriptional regulator

Gene

SCO6599

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative transcriptional regulatorImported
Gene namesi
Ordered Locus Names:SCO6599Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO6599.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2HXIX-ray1.70A/B1-217[»]
ProteinModelPortaliO87854.
SMRiO87854. Positions 6-204.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO87854.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini6 – 6661HTH tetR-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH tetR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000110164.
OMAiEGDWKQR.
OrthoDBiPOG091H02BD.
PhylomeDBiO87854.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
IPR004111. Tet_transcr_reg_TetR_C.
[Graphical view]
PfamiPF02909. TetR_C. 1 hit.
PF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O87854-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGRRRWSTE QILDAAAELL LAGDAETFSV RKLAASLGTD SSSLYRHFRN
60 70 80 90 100
KTELLRAVAD RILLSAMDGY RPEGDWKQRL TAVALRLRES FGQQPQLAAV
110 120 130 140 150
WGRHGSGGTG SRLMMEEVLQ ALRASGLPDD EIPARYHRLV ILISSLITAE
160 170 180 190 200
GGFGAVGAQE HEQGMEQFRV AVLGADPERF PALSHFAREI RPLGADRGAA
210
FEEILAAHLA HLEAAAP
Length:217
Mass (Da):23,650
Last modified:November 1, 1998 - v1
Checksum:iECB2134F06813502
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939128 Genomic DNA. Translation: CAA19792.1.
PIRiT35787.
RefSeqiNP_630678.1. NC_003888.3.
WP_011031034.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA19792; CAA19792; CAA19792.
GeneIDi1102038.
KEGGisco:SCO6599.
PATRICi23743121. VBIStrCoe124346_6706.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939128 Genomic DNA. Translation: CAA19792.1.
PIRiT35787.
RefSeqiNP_630678.1. NC_003888.3.
WP_011031034.1. NC_003888.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2HXIX-ray1.70A/B1-217[»]
ProteinModelPortaliO87854.
SMRiO87854. Positions 6-204.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO6599.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAA19792; CAA19792; CAA19792.
GeneIDi1102038.
KEGGisco:SCO6599.
PATRICi23743121. VBIStrCoe124346_6706.

Phylogenomic databases

HOGENOMiHOG000110164.
OMAiEGDWKQR.
OrthoDBiPOG091H02BD.
PhylomeDBiO87854.

Miscellaneous databases

EvolutionaryTraceiO87854.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
IPR004111. Tet_transcr_reg_TetR_C.
[Graphical view]
PfamiPF02909. TetR_C. 1 hit.
PF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO87854_STRCO
AccessioniPrimary (citable) accession number: O87854
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: September 7, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.