Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Transcriptional regulator

Gene

SCO6598

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi8 – 27H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulatorImported
Gene namesi
Ordered Locus Names:SCO6598Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO6598.

Structurei

3D structure databases

ProteinModelPortaliO87853.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 60HTH lacI-typeInterPro annotationAdd BLAST55

Phylogenomic databases

HOGENOMiHOG000220179.
InParanoidiO87853.
OMAiFADPFFG.
OrthoDBiPOG091H01VT.
PhylomeDBiO87853.

Family and domain databases

CDDicd01392. HTH_LacI. 1 hit.
InterProiView protein in InterPro
IPR000843. HTH_LacI.
IPR010982. Lambda_DNA-bd_dom_sf.
IPR028082. Peripla_BP_I.
PfamiView protein in Pfam
PF00356. LacI. 1 hit.
PRINTSiPR00036. HTHLACI.
SMARTiView protein in SMART
SM00354. HTH_LACI. 1 hit.
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
PROSITEiView protein in PROSITE
PS50932. HTH_LACI_2. 1 hit.

Sequencei

Sequence statusi: Complete.

O87853-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRQAPTLED VAREAGVSRA TVSRVVNGVR NVDPAIQDLV RRAIERTGYA
60 70 80 90 100
PNQAARQLVT RRTTTVALVV SGAGDATDTE QNAFATRVFA DPFFGRVVGG
110 120 130 140 150
VVGHLRPRRM HPVLMFAETP EARQEVVAYL RQGGADGALV VSTHPDDPLP
160 170 180 190 200
ALLAGAGLPA VLFARPGRPV PLSYVDLAHR EGGRLAAEHL LERGCRRIAT
210 220 230 240 250
VAGPLAVAAS QERLAGFRDT LARHGHPYVP VAEGGFTVDS GMAAMTSLLA
260 270 280 290 300
EHPDTDGVFT ANDLMAQGAV QVLRDHGRRV PQDVAVVGFD DSSVAVTCRP
310 320 330 340
RLTTVRQPVE EMAATMARLL DDHIKGARGE PTSVVFDPEL VVRESA
Length:346
Mass (Da):36,869
Last modified:November 1, 1998 - v1
Checksum:iC20C31C4FF2DB032
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939128 Genomic DNA. Translation: CAA19791.1.
PIRiT35786.
RefSeqiNP_630677.1. NC_003888.3.
WP_003972380.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA19791; CAA19791; CAA19791.
GeneIDi1102037.
29659670.
KEGGisco:SCO6598.
PATRICifig|100226.15.peg.6705.

Similar proteinsi

Entry informationi

Entry nameiO87853_STRCO
AccessioniPrimary (citable) accession number: O87853
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: November 22, 2017
This is version 105 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported