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Protein
Submitted name:

Putative LacI family regulator

Gene

SCO1642

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative LacI family regulatorImported
Submitted name:
Putative LacI family repressorImported
Gene namesi
Ordered Locus Names:SCO1642Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3030Sequence analysisAdd
BLAST
Chaini31 – 350320Sequence analysisPRO_5006739340Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO1642.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini22 – 7857HTH lacI-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains HTH lacI-type DNA-binding domain.SAAS annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105HQQ. Bacteria.
COG1609. LUCA.
HOGENOMiHOG000220179.
OMAiDIPSWTF.
OrthoDBiEOG6SJJMM.
PhylomeDBiO87600.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
InterProiIPR010982. Lambda_DNA-bd_dom.
IPR028082. Peripla_BP_I.
IPR000843. Tscrpt_reg_HTH_LacI.
[Graphical view]
PfamiPF00356. LacI. 1 hit.
[Graphical view]
SMARTiSM00354. HTH_LACI. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
PROSITEiPS50932. HTH_LACI_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O87600-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSPVQQSRRK RRRTVARGST RPTSRDVAQA AGVSQAAVSL VLGDKWRGRV
60 70 80 90 100
SEPTAQRVRD AALELGYRPN LAARNLRLGR TRTVLLVVPA LTTEFFAEVY
110 120 130 140 150
TGAARVAAEH GFGVVLYPSP EGVGPARDPF ASAQAALDGV IASSMAADAL
160 170 180 190 200
SAIRGDQLPL VMLDSDPEGS LGAATVNLDI ADGIRQVTEH LLSLGHRGFL
210 220 230 240 250
HLAADIPSWT FEVRARELAS RLADAPGTEL RTIRAPISIE GALRATEAAL
260 270 280 290 300
AAPGPRPTAL VCDDDKLAAG AYKAIRRAGL RVPDDLSVTG LDDLGLATAI
310 320 330 340 350
DPELTTVRLD AEAFGERGMR ALLAVLEGRP PEKGDLPVSL VVRGSTAPPR
Length:350
Mass (Da):36,898
Last modified:November 1, 1998 - v1
Checksum:i522AAFB6E85E1853
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF086832 Genomic DNA. Translation: AAC64279.1.
AL939109 Genomic DNA. Translation: CAB59495.1.
RefSeqiNP_625917.1. NC_003888.3.
WP_003977184.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAB59495; CAB59495; CAB59495.
GeneIDi1097073.
KEGGisco:SCO1642.
PATRICi23732886. VBIStrCoe124346_1657.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF086832 Genomic DNA. Translation: AAC64279.1.
AL939109 Genomic DNA. Translation: CAB59495.1.
RefSeqiNP_625917.1. NC_003888.3.
WP_003977184.1. NC_003888.3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO1642.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAB59495; CAB59495; CAB59495.
GeneIDi1097073.
KEGGisco:SCO1642.
PATRICi23732886. VBIStrCoe124346_1657.

Phylogenomic databases

eggNOGiENOG4105HQQ. Bacteria.
COG1609. LUCA.
HOGENOMiHOG000220179.
OMAiDIPSWTF.
OrthoDBiEOG6SJJMM.
PhylomeDBiO87600.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
InterProiIPR010982. Lambda_DNA-bd_dom.
IPR028082. Peripla_BP_I.
IPR000843. Tscrpt_reg_HTH_LacI.
[Graphical view]
PfamiPF00356. LacI. 1 hit.
[Graphical view]
SMARTiSM00354. HTH_LACI. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
PROSITEiPS50932. HTH_LACI_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The 20S proteasome of Streptomyces coelicolor."
    Nagy I., Tamura T., Vanderleyden J., Baumeister W., De Mot R.
    J. Bacteriol. 180:5448-5453(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: A3Imported.
  2. De Mot R.
    Submitted (JUN-1999) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: A3Imported.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: A3Imported and ATCC BAA-471 / A3(2) / M145Imported.

Entry informationi

Entry nameiO87600_STRCO
AccessioniPrimary (citable) accession number: O87600
Secondary accession number(s): Q7AKQ7
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: May 11, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.