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Protein
Submitted name:

HrcC

Gene

hrcC

Organism
Pseudomonas syringae pv. tomato
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
HrcCImported
Gene namesi
Name:hrcCImported
OrganismiPseudomonas syringae pv. tomatoImported
Taxonomic identifieri323 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini175 – 318Secretin_NInterPro annotationAdd BLAST144

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O87441-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRKALMWLPL LLIGVIPATW AVTPEAWKHT AYAYDARQTE LSTALADFAR
60 70 80 90 100
EFGMSLDMSP VQGNLDGRIR AQNPEEFLER LSQEYHFQWF VYNDTLYVSP
110 120 130 140 150
SSEHTSGRIE VSPDAVDDLQ TALTDVGLVD KRLGWGSLPD EGVVLVRGPA
160 170 180 190 200
KYVEFVRDYS KKVEKPDEKA DKQDVVVLPL KYANAADRTI RYRDQQLVVA
210 220 230 240 250
GVASILQELL ESRSRGESID SVNLLAGQGS SVANSTGVAA PACLTTWAPM
260 270 280 290 300
VSIREHCNRG IAPRIELQQQ KNCQGSCLRQ GNIRVSADVR NNSVLIYDLP
310 320 330 340 350
ERKAMYQKLV KELDVPRNLI EIDAVILDID PNELAELSSR LEFQCPAASE
360 370 380 390 400
VGANLFDGGT SSTLFLQNAS KFSAELHALE GNGSASVIAN PSILTLENQP
410 420 430 440 450
AVIDLSRTEY LTPTSERAAD ILPITAGTSL QVIPRSLDND GKPQVQMIVD
460 470 480 490 500
IEDGQIDVST INDTQPSVRR GNVSTQAVIA EHGSLVIGGF HGLEANDRIH
510 520 530 540 550
KIPLLGDIPY IGKLLFQSRS RELSQRERLF ILTPRLIGDQ VNPARYVQNG
560 570 580 590 600
NPHDVDDQMK KIKERRDGGR LPTRGDIQKV FTQMIDGPAP EGLRAGQTLP
610 620 630 640 650
FETRSLCDPG EGLTLDGQRS QWFVKKDWGV AVVVARNNTD KPVRIDESRC
660 670 680 690 700
GGRWVIGVAA WPHAWLQPGE ESEVYIAVRQ PQISKMAKES RPSLLRGAKP
Length:700
Mass (Da):77,301
Last modified:November 1, 1998 - v1
Checksum:i93F8985CD7AC3ABA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF232004 Genomic DNA. Translation: AAC34756.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF232004 Genomic DNA. Translation: AAC34756.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO87441_PSEUB
AccessioniPrimary (citable) accession number: O87441
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: December 9, 2015
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.