Reviewed,
UniProtKB/Swiss-Prot O87387 (SOXD_RHIME)
Last modified
November 25, 2008.
Version 43.
History...
Clusters with 100%,
90%,
50% identity |
Third-party data |
Customize display | text xml rdf/xml gff fasta |
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Recommended name: Sarcosine oxidase subunit delta Short name=Sarcosine oxidase subunit D EC=1.5.3.1 | ||||||
| Gene names |
| ||||||
| Organism | Rhizobium meliloti (Sinorhizobium meliloti) [Complete proteome] [HAMAP] | ||||||
| Taxonomic identifier | 382 [NCBI] | ||||||
| Taxonomic lineage | Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium |
Protein attributes
| Sequence length | 92 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Inferred from homology. |
General annotation (Comments)
| Function | Catalyzes the oxidative demethylation of sarcosine to yield glycine, hydrogen peroxide and 5,10-methylenetetrahydrofolate. |
| Catalytic activity | Sarcosine + H(2)O + O(2) = glycine + formaldehyde + H(2)O(2). |
| Subcellular location | CytoplasmBy similarity. |
Ontologies
Keywords | |
|---|---|
| Cellular component | Cytoplasm |
| Molecular function | Oxidoreductase |
| Technical term | Complete proteome |
Gene Ontology (GO) | |
| Biological process | oxidation reduction Inferred from electronic annotation. Source: UniProtKB-KW tetrahydrofolate metabolic processInferred from electronic annotation. Source: InterPro |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | sarcosine oxidase activity Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||
Molecule processing | |||||||
|---|---|---|---|---|---|---|---|
| Chain | 1 – 92 | 92 | Sarcosine oxidase subunit delta | PRO_0000072050 | |||
Sequences
References
| « Hide 'large scale' references | |
| [1] | Powers E.L., Vuyyuru V., Kahn M.L. Submitted (MAR-1998) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: 1021. |
| [2] | "Analysis of the chromosome sequence of the legume symbiont Sinorhizobium meliloti strain 1021." Capela D., Barloy-Hubler F., Gouzy J., Bothe G., Ampe F., Batut J., Boistard P., Becker A., Boutry M., Cadieu E., Dreano S., Gloux S., Godrie T., Goffeau A., Kahn D., Kiss E., Lelaure V., Masuy D. Galibert F.Proc. Natl. Acad. Sci. U.S.A. 98:9877-9882(2001) [PubMed: 11481430] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 1021. |
Cross-references
Sequence databases | |
|---|---|
| AF055582 Genomic DNA. Translation: AAC62217.1. AL591688 Genomic DNA. Translation: CAC41471.1. | |
| RefSeq | NP_384190.1. |
3D structure databases | |
| ModBase | Search... |
Genome annotation databases | |
| GeneID | 1231715. |
| GenomeReviews | Gene locus R00084 in contig AL591688_GR. |
| KEGG | sme:SMc02607. |
| NMPDR | fig|266834.1.peg.1378. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | O87387. |
Enzyme and pathway databases | |
| BioCyc | SMEL266834:SMC02607-MON. |
Family and domain databases | |
| InterPro | IPR006279. SoxD. [Graphical view] |
| Pfam | PF04267. SoxD. 1 hit. [Graphical view] |
| ProDom | PD066847. SoxD. 1 hit. [Graphical view] [Entries sharing at least one domain] |
| TIGRFAMs | TIGR01374. soxD. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | SOXD_RHIME | ||||||||
| Accession | Primary (citable) accession number: O87387 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes) | ||||||||

Clusters with


