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Unreviewed, UniProtKB/TrEMBL O87327 (O87327_PSESX)

Last modified April 14, 2009. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Hrp type III secreted protein EMBL AAC62530.1
Gene names
Name: hrpW EMBL AAC62530.1
OrganismPseudomonas syringae EMBL AAC62530.1
Taxonomic identifier317 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

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Protein attributes

Sequence length441 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

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Ontologies

Gene Ontology (GO)
   Cellular componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular functionpectate lyase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

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Sequences

Sequence LengthMass (Da)Tools
O87327-1 [UniParc].

Last modified November 1, 1998. Version 1.
Checksum: 7B3B3146E51897BB

FASTA44144,714
        10         20         30         40         50         60 
MSIGINSSTS YQPASTQLDF SALSGKSPQT NTFSDESTAQ GVDPSALLFD TARQKDVSFG 

        70         80         90        100        110        120 
QPDNTVQNPT DSSAATDPQS NVVKLLSALV TSLLQMLMNL NKKQDTGQDS NEWQDPFQNE 

       130        140        150        160        170        180 
GGLGTPSAEG SDGGTQEASG GDEGGGTTAA TGGDGGGGTS PTTEGDGGGT SPTAEGDGGG 

       190        200        210        220        230        240 
SYVSTGADGS GAPSTEDGTG GGGGSDGVTP QVTPQLANPG RNSGNGTVSD TTGSLEQSGE 

       250        260        270        280        290        300 
VNVVKDTIKV GAGQVFDGHG ATFTADKSMG TGDQDEHQKP LFELAEGAVL KNVNLGENEA 

       310        320        330        340        350        360 
DGIHVNAKNS EQVTIDNVHA QNVGEDMITV KGEGGAKVTN LNITNSSANG ADDKVIQLNA 

       370        380        390        400        410        420 
DTHLKVDGFK ATDFGTLVRT NGGKQFDDMS VELNGVDATH GKFALVKSDS DDLKLATGDI 

       430        440 
AMTDVKHAYD KTKASTQHTE L

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References

[1]"The Pseudomonas syringae pv. tomato HrpW protein has domains similar to harpins and pectate lyases and can elicit the plant hypersensitive response and bind to pectate."
Charkowski A.O., Alfano J.R., Preston G., Yuan J., He S.Y., Collmer A.
J. Bacteriol. 180:5211-5217(1998) [PubMed: 9748456] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: B728a EMBL AAC62530.1.

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Cross-references

Sequence databases

AF037983 Genomic DNA. Translation: AAC62530.1.

3D structure databases

HSSPHSSP built from PDB template 1EE6 based on UniProtKB Q9RHW0.
ModBaseSearch...

Protein family/group databases

CAZyPL3. Polysaccharide Lyase Family 3.

Family and domain databases

InterProIPR004898. Pectate_lyase_cat.
IPR012334. Pectin_lyas_fold.
[Graphical view]
Gene3DG3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
PfamPF03211. Pectate_lyase. 1 hit.
[Graphical view]
ProtoNetSearch...

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Entry information

Entry nameO87327_PSESX
AccessionPrimary (citable) accession number: O87327
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: April 14, 2009
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information