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O87326

- TRL_HELPY

UniProt

O87326 - TRL_HELPY

Protein

Protein trl

Gene

trl

Organism
Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Status
Reviewed - Annotation score: 1 out of 5- Protein predictedi
  1. Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein trl
    Alternative name(s):
    tRNA-associated locus protein
    Gene namesi
    Name:trl
    Ordered Locus Names:HP_0945.1
    OrganismiHelicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
    Taxonomic identifieri85962 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
    ProteomesiUP000000429: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 8686Protein trlPRO_0000065633Add
    BLAST

    Family & Domainsi

    Phylogenomic databases

    OMAiCEDIRAL.

    Family and domain databases

    InterProiIPR025113. TRL-like.
    [Graphical view]
    PfamiPF13146. TRL. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    O87326-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSGCASSSPT GTLITMVTMP VSGNDAQYSK EGRASCWSVF SLVAAGNCSV   50
    EKAAKSGGVT KIKMVSRETN NFLGIVGKYT TIVQGD 86
    Length:86
    Mass (Da):8,871
    Last modified:April 27, 2001 - v2
    Checksum:i786E7F626E09D20B
    GO

    Natural variant

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Natural varianti12 – 121T → A in strain: MI 212.
    Natural varianti26 – 261A → V in strain: MI 212.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF035574 Genomic DNA. Translation: AAC35746.1.
    AE000511 Genomic DNA. No translation available.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF035574 Genomic DNA. Translation: AAC35746.1 .
    AE000511 Genomic DNA. No translation available.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Phylogenomic databases

    OMAi CEDIRAL.

    Family and domain databases

    InterProi IPR025113. TRL-like.
    [Graphical view ]
    Pfami PF13146. TRL. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A novel tRNA-associated locus (trl) from Helicobacter pylori is co-transcribed with tRNA(Gly) and reveals genetic diversity."
      Dundon W.G., Marshall D.G., Morain C.A., Smyth C.J.
      Microbiology 145:1289-1298(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: MI 212.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 700392 / 26695.

    Entry informationi

    Entry nameiTRL_HELPY
    AccessioniPrimary (citable) accession number: O87326
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 27, 2001
    Last sequence update: April 27, 2001
    Last modified: May 14, 2014
    This is version 41 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Helicobacter pylori
      Helicobacter pylori (strain 26695): entries and gene names

    External Data

    Dasty 3