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O87326

- TRL_HELPY

UniProt

O87326 - TRL_HELPY

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Protein

Protein trl

Gene
trl, HP_0945.1
Organism
Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Status
Reviewed - Annotation score: 1 out of 5 - Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Protein trl
Alternative name(s):
tRNA-associated locus protein
Gene namesi
Name:trl
Ordered Locus Names:HP_0945.1
OrganismiHelicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)
Taxonomic identifieri85962 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
ProteomesiUP000000429: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 8686Protein trlPRO_0000065633Add
BLAST

Family & Domainsi

Phylogenomic databases

OMAiCEDIRAL.

Family and domain databases

InterProiIPR025113. TRL-like.
[Graphical view]
PfamiPF13146. TRL. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O87326-1 [UniParc]FASTAAdd to Basket

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MSGCASSSPT GTLITMVTMP VSGNDAQYSK EGRASCWSVF SLVAAGNCSV   50
EKAAKSGGVT KIKMVSRETN NFLGIVGKYT TIVQGD 86
Length:86
Mass (Da):8,871
Last modified:April 27, 2001 - v2
Checksum:i786E7F626E09D20B
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti12 – 121T → A in strain: MI 212.
Natural varianti26 – 261A → V in strain: MI 212.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF035574 Genomic DNA. Translation: AAC35746.1.
AE000511 Genomic DNA. No translation available.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF035574 Genomic DNA. Translation: AAC35746.1 .
AE000511 Genomic DNA. No translation available.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Phylogenomic databases

OMAi CEDIRAL.

Family and domain databases

InterProi IPR025113. TRL-like.
[Graphical view ]
Pfami PF13146. TRL. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "A novel tRNA-associated locus (trl) from Helicobacter pylori is co-transcribed with tRNA(Gly) and reveals genetic diversity."
    Dundon W.G., Marshall D.G., Morain C.A., Smyth C.J.
    Microbiology 145:1289-1298(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: MI 212.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700392 / 26695.

Entry informationi

Entry nameiTRL_HELPY
AccessioniPrimary (citable) accession number: O87326
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: April 27, 2001
Last modified: May 14, 2014
This is version 41 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Helicobacter pylori
    Helicobacter pylori (strain 26695): entries and gene names

External Data

Dasty 3

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