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Protein

USG-1 protein homolog

Gene

usg

Organism
Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
USG-1 protein homolog
Gene namesi
Name:usg
Ordered Locus Names:PA3116
OrganismiPseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Taxonomic identifieri208964 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002438 Componenti: Chromosome

Organism-specific databases

PseudoCAPiPA3116.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001414041 – 336USG-1 protein homologAdd BLAST336

Proteomic databases

PaxDbiO87014.
PRIDEiO87014.

Interactioni

Protein-protein interaction databases

STRINGi208964.PA3116.

Structurei

Secondary structure

1336
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi7 – 10Combined sources4
Turni11 – 13Combined sources3
Helixi15 – 26Combined sources12
Beta strandi34 – 38Combined sources5
Turni40 – 44Combined sources5
Beta strandi46 – 49Combined sources4
Beta strandi52 – 55Combined sources4
Helixi59 – 61Combined sources3
Helixi64 – 66Combined sources3
Beta strandi68 – 72Combined sources5
Helixi76 – 88Combined sources13
Beta strandi92 – 95Combined sources4
Turni99 – 104Combined sources6
Helixi110 – 113Combined sources4
Helixi114 – 119Combined sources6
Beta strandi125 – 127Combined sources3
Helixi131 – 143Combined sources13
Turni144 – 146Combined sources3
Beta strandi149 – 158Combined sources10
Helixi160 – 163Combined sources4
Helixi165 – 179Combined sources15
Beta strandi187 – 191Combined sources5
Beta strandi198 – 202Combined sources5
Helixi211 – 223Combined sources13
Helixi225 – 227Combined sources3
Beta strandi231 – 237Combined sources7
Beta strandi244 – 254Combined sources11
Helixi258 – 267Combined sources10
Beta strandi271 – 273Combined sources3
Helixi282 – 286Combined sources5
Beta strandi292 – 299Combined sources8
Beta strandi306 – 313Combined sources8
Helixi315 – 320Combined sources6
Helixi321 – 334Combined sources14

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2HJSX-ray2.20A1-336[»]
ProteinModelPortaliO87014.
SMRiO87014.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO87014.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4105CM3. Bacteria.
COG0136. LUCA.
HOGENOMiHOG000013357.
InParanoidiO87014.
OMAiESAGQRM.
PhylomeDBiO87014.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR012080. Asp_semialdehyde_DH.
IPR016040. NAD(P)-bd_dom.
IPR000534. Semialdehyde_DH_NAD-bd.
IPR012280. Semialdhyde_DH_dimer_dom.
[Graphical view]
PfamiPF01118. Semialdhyde_dh. 1 hit.
PF02774. Semialdhyde_dhC. 1 hit.
[Graphical view]
PIRSFiPIRSF000148. ASA_dh. 1 hit.
SMARTiSM00859. Semialdhyde_dh. 1 hit.
[Graphical view]
SUPFAMiSSF51735. SSF51735. 1 hit.

Sequencei

Sequence statusi: Complete.

O87014-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQPLNVAVV GATGSVGEAL VGLLDERDFP LHRLHLLASA ESAGQRMGFA
60 70 80 90 100
ESSLRVGDVD SFDFSSVGLA FFAAAAEVSR AHAERARAAG CSVIDLSGAL
110 120 130 140 150
EPSVAPPVMV SVNAERLASQ AAPFLLSSPC AVAAELCEVL APLLATLDCR
160 170 180 190 200
QLNLTACLSV SSLGREGVKE LARQTAELLN ARPLEPRLFD RQIAFNLLAQ
210 220 230 240 250
VGAVDAEGHS AIERRIFAEV QALLGERIGP LNVTCIQAPV FFGDSLSVTL
260 270 280 290 300
QCAEPVDLAA VTRVLDATKG IEWVGEGDYP TVVGDALGQD ETYVGRVRAG
310 320 330
QADPCQVNLW IVSDNVRKGA ALNAVLLGEL LIKHYL
Length:336
Mass (Da):35,349
Last modified:December 8, 2000 - v2
Checksum:i74BC3F544FF6EB68
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti39S → T in AAC23939 (PubMed:10846211).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U93274 Genomic DNA. Translation: AAC23939.1.
AE004091 Genomic DNA. Translation: AAG06504.1.
PIRiB83255.
RefSeqiNP_251806.1. NC_002516.2.
WP_003115016.1. NZ_ASJY01000511.1.

Genome annotation databases

EnsemblBacteriaiAAG06504; AAG06504; PA3116.
GeneIDi882802.
KEGGipae:PA3116.
PATRICi19840805. VBIPseAer58763_3268.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U93274 Genomic DNA. Translation: AAC23939.1.
AE004091 Genomic DNA. Translation: AAG06504.1.
PIRiB83255.
RefSeqiNP_251806.1. NC_002516.2.
WP_003115016.1. NZ_ASJY01000511.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2HJSX-ray2.20A1-336[»]
ProteinModelPortaliO87014.
SMRiO87014.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi208964.PA3116.

Proteomic databases

PaxDbiO87014.
PRIDEiO87014.

Protocols and materials databases

DNASUi882802.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAG06504; AAG06504; PA3116.
GeneIDi882802.
KEGGipae:PA3116.
PATRICi19840805. VBIPseAer58763_3268.

Organism-specific databases

PseudoCAPiPA3116.

Phylogenomic databases

eggNOGiENOG4105CM3. Bacteria.
COG0136. LUCA.
HOGENOMiHOG000013357.
InParanoidiO87014.
OMAiESAGQRM.
PhylomeDBiO87014.

Miscellaneous databases

EvolutionaryTraceiO87014.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR012080. Asp_semialdehyde_DH.
IPR016040. NAD(P)-bd_dom.
IPR000534. Semialdehyde_DH_NAD-bd.
IPR012280. Semialdhyde_DH_dimer_dom.
[Graphical view]
PfamiPF01118. Semialdhyde_dh. 1 hit.
PF02774. Semialdhyde_dhC. 1 hit.
[Graphical view]
PIRSFiPIRSF000148. ASA_dh. 1 hit.
SMARTiSM00859. Semialdhyde_dh. 1 hit.
[Graphical view]
SUPFAMiSSF51735. SSF51735. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiUSG_PSEAE
AccessioniPrimary (citable) accession number: O87014
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: December 8, 2000
Last modified: November 2, 2016
This is version 98 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.