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Protein

USG-1 protein homolog

Gene

usg

Organism
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
USG-1 protein homolog
Gene namesi
Name:usg
Ordered Locus Names:PA3116
OrganismiPseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Taxonomic identifieri208964 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002438 Componenti: Chromosome

Organism-specific databases

PseudoCAPiPA3116.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 336336USG-1 protein homologPRO_0000141404Add
BLAST

Proteomic databases

PaxDbiO87014.

Interactioni

Protein-protein interaction databases

STRINGi208964.PA3116.

Structurei

Secondary structure

1
336
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi7 – 104Combined sources
Turni11 – 133Combined sources
Helixi15 – 2612Combined sources
Beta strandi34 – 385Combined sources
Turni40 – 445Combined sources
Beta strandi46 – 494Combined sources
Beta strandi52 – 554Combined sources
Helixi59 – 613Combined sources
Helixi64 – 663Combined sources
Beta strandi68 – 725Combined sources
Helixi76 – 8813Combined sources
Beta strandi92 – 954Combined sources
Turni99 – 1046Combined sources
Helixi110 – 1134Combined sources
Helixi114 – 1196Combined sources
Beta strandi125 – 1273Combined sources
Helixi131 – 14313Combined sources
Turni144 – 1463Combined sources
Beta strandi149 – 15810Combined sources
Helixi160 – 1634Combined sources
Helixi165 – 17915Combined sources
Beta strandi187 – 1915Combined sources
Beta strandi198 – 2025Combined sources
Helixi211 – 22313Combined sources
Helixi225 – 2273Combined sources
Beta strandi231 – 2377Combined sources
Beta strandi244 – 25411Combined sources
Helixi258 – 26710Combined sources
Beta strandi271 – 2733Combined sources
Helixi282 – 2865Combined sources
Beta strandi292 – 2998Combined sources
Beta strandi306 – 3138Combined sources
Helixi315 – 3206Combined sources
Helixi321 – 33414Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2HJSX-ray2.20A1-336[»]
ProteinModelPortaliO87014.
SMRiO87014. Positions 3-336.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO87014.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4105CM3. Bacteria.
COG0136. LUCA.
HOGENOMiHOG000013357.
InParanoidiO87014.
OMAiESAGQRM.
OrthoDBiEOG6JB158.
PhylomeDBiO87014.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR012080. Asp_semialdehyde_DH.
IPR016040. NAD(P)-bd_dom.
IPR000534. Semialdehyde_DH_NAD-bd.
IPR012280. Semialdhyde_DH_dimer_dom.
[Graphical view]
PfamiPF01118. Semialdhyde_dh. 1 hit.
PF02774. Semialdhyde_dhC. 1 hit.
[Graphical view]
PIRSFiPIRSF000148. ASA_dh. 1 hit.
SMARTiSM00859. Semialdhyde_dh. 1 hit.
[Graphical view]
SUPFAMiSSF51735. SSF51735. 1 hit.

Sequencei

Sequence statusi: Complete.

O87014-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQPLNVAVV GATGSVGEAL VGLLDERDFP LHRLHLLASA ESAGQRMGFA
60 70 80 90 100
ESSLRVGDVD SFDFSSVGLA FFAAAAEVSR AHAERARAAG CSVIDLSGAL
110 120 130 140 150
EPSVAPPVMV SVNAERLASQ AAPFLLSSPC AVAAELCEVL APLLATLDCR
160 170 180 190 200
QLNLTACLSV SSLGREGVKE LARQTAELLN ARPLEPRLFD RQIAFNLLAQ
210 220 230 240 250
VGAVDAEGHS AIERRIFAEV QALLGERIGP LNVTCIQAPV FFGDSLSVTL
260 270 280 290 300
QCAEPVDLAA VTRVLDATKG IEWVGEGDYP TVVGDALGQD ETYVGRVRAG
310 320 330
QADPCQVNLW IVSDNVRKGA ALNAVLLGEL LIKHYL
Length:336
Mass (Da):35,349
Last modified:December 8, 2000 - v2
Checksum:i74BC3F544FF6EB68
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti39 – 391S → T in AAC23939 (PubMed:10846211).Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U93274 Genomic DNA. Translation: AAC23939.1.
AE004091 Genomic DNA. Translation: AAG06504.1.
PIRiB83255.
RefSeqiNP_251806.1. NC_002516.2.
WP_003115016.1. NZ_ASJY01000511.1.

Genome annotation databases

EnsemblBacteriaiAAG06504; AAG06504; PA3116.
GeneIDi882802.
KEGGipae:PA3116.
PATRICi19840805. VBIPseAer58763_3268.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U93274 Genomic DNA. Translation: AAC23939.1.
AE004091 Genomic DNA. Translation: AAG06504.1.
PIRiB83255.
RefSeqiNP_251806.1. NC_002516.2.
WP_003115016.1. NZ_ASJY01000511.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2HJSX-ray2.20A1-336[»]
ProteinModelPortaliO87014.
SMRiO87014. Positions 3-336.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi208964.PA3116.

Proteomic databases

PaxDbiO87014.

Protocols and materials databases

DNASUi882802.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAG06504; AAG06504; PA3116.
GeneIDi882802.
KEGGipae:PA3116.
PATRICi19840805. VBIPseAer58763_3268.

Organism-specific databases

PseudoCAPiPA3116.

Phylogenomic databases

eggNOGiENOG4105CM3. Bacteria.
COG0136. LUCA.
HOGENOMiHOG000013357.
InParanoidiO87014.
OMAiESAGQRM.
OrthoDBiEOG6JB158.
PhylomeDBiO87014.

Miscellaneous databases

EvolutionaryTraceiO87014.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR012080. Asp_semialdehyde_DH.
IPR016040. NAD(P)-bd_dom.
IPR000534. Semialdehyde_DH_NAD-bd.
IPR012280. Semialdhyde_DH_dimer_dom.
[Graphical view]
PfamiPF01118. Semialdhyde_dh. 1 hit.
PF02774. Semialdhyde_dhC. 1 hit.
[Graphical view]
PIRSFiPIRSF000148. ASA_dh. 1 hit.
SMARTiSM00859. Semialdhyde_dh. 1 hit.
[Graphical view]
SUPFAMiSSF51735. SSF51735. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Identification of a novel gene, fimV, involved in twitching motility in Pseudomonas aeruginosa."
    Semmler A.B., Whitchurch C.B., Leech A.J., Mattick J.S.
    Microbiology 146:1321-1332(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228.

Entry informationi

Entry nameiUSG_PSEAE
AccessioniPrimary (citable) accession number: O87014
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: December 8, 2000
Last modified: June 8, 2016
This is version 95 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.