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UniProtKB - O86876 (O86876_STRLI)

UniProt

O86876 - O86876_STRLI

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Protein

Alpha-amylase

Gene

aml

Organism
Streptomyces lividans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Protein family/group databases

CAZyiCBM20. Carbohydrate-Binding Module Family 20.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Name:amlImported
OrganismiStreptomyces lividansImported
Taxonomic identifieri1916 [NCBI]
Taxonomic lineageiBacteria › Actinobacteria › Streptomycetales › Streptomycetaceae › Streptomyces

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3535Sequence analysisAdd
BLAST
Chaini36 – 574539Alpha-amylaseSequence analysisPRO_5004161080Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliO86876.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini469 – 574106CBM20 (carbohydrate binding type-20)InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotationSAAS annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase/branching_C.
IPR031319. A-amylase_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMiSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51166. CBM20. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O86876-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHGNTSPARR ITATALALTA GVAGSLLATT APAQASPPGD KDVTAVMFEW 
        60         70         80         90        100
KFTSVAQACT DTLGPAGYGY VQVSPPQEHI QGGQWWTSYQ PVSYRIAGRL 
       110        120        130        140        150
GDRAQFKSMV DTCHAAGVKV VADSVVNHMS AGNGTGTGGS SYTKYDYPGL 
       160        170        180        190        200
YSSNDLDNCT SQINNYGDRF NVQECELVGL ADLDTGEDYV RGKIAGYLND 
       210        220        230        240        250
LLSLGVDGFR IDAAKHMAAP DLAAIKSRLS NPNVYWKHEA IYGSGEAVSP 
       260        270        280        290        300
TEYVGCGDVQ EFRYARDLKR VLQGENLAYL KNFGEAWGHL PSDEAAVFVT 
       310        320        330        340        350
NHDTERNGET LTYKDGATYT LAHVFMLAWP YGSPDVHSGY EFTDHDAGPP 
       360        370        380        390        400
NGVQVNACYS DGWKCQHAWC EISSMVAFRN TARGQGVTDW WDNGGDQIAF 
       410        420        430        440        450
GRGSKAYVAI NHEGTSLTRT FQTSLPAGDY CDVQTGKGVT VNGAGRFTAT 
       460        470        480        490        500
LGAGTAVALH VGARTCDGGD PGDPDPVSFR RVPSAVDATT SWGQNIYVTG 
       510        520        530        540        550
NRPELGNWNP GGALQLDPAA YPVWKRDVEL PEGTTFEYKY LRKDDAGNVT 
       560        570 
WESGANRTAT VNTTKTTLND TWRN
Length:574
Mass (Da):61,758
Last modified:November 1, 1998 - v1
Checksum:iA040AA1092C22270
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y13601 Genomic DNA. Translation: CAA73926.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y13601 Genomic DNA. Translation: CAA73926.1.

3D structure databases

ProteinModelPortaliO86876.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM20. Carbohydrate-Binding Module Family 20.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase/branching_C.
IPR031319. A-amylase_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMiSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51166. CBM20. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO86876_STRLI
AccessioniPrimary (citable) accession number: O86876
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: May 11, 2016
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.