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Protein
Submitted name:

Putative transcriptional regulator

Gene

SCO4754

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative transcriptional regulatorImported
Gene namesi
Ordered Locus Names:SCO4754Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO4754.

Structurei

3D structure databases

ProteinModelPortaliO86795.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini19 – 72HTH lacI-type DNA-bindingInterPro annotationAdd BLAST54

Phylogenomic databases

eggNOGiENOG4105ETE. Bacteria.
COG1609. LUCA.
HOGENOMiHOG000220179.
InParanoidiO86795.
KOiK17640.
OMAiSAWAMEV.
OrthoDBiPOG091H01VT.
PhylomeDBiO86795.

Family and domain databases

CDDicd01392. HTH_LacI. 1 hit.
Gene3Di1.10.260.40. 1 hit.
InterProiIPR000843. HTH_LacI.
IPR010982. Lambda_DNA-bd_dom.
IPR028082. Peripla_BP_I.
[Graphical view]
PfamiPF00356. LacI. 1 hit.
[Graphical view]
SMARTiSM00354. HTH_LACI. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
PROSITEiPS50932. HTH_LACI_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O86795-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTSPQPAETR TQKRSAQTAT LAEIAREAGV SAPTVSKVLN GRADVAPSTR
60 70 80 90 100
ARVEELLRTH GYRRRRAEST RSPLIDLVFH ELESAWAMEV IRGVENVARD
110 120 130 140 150
AGLSVVLSES AGRLTPGRTW ADQVAARRPH GVILVLSGLD ESQRALLTSR
160 170 180 190 200
SIPFVVMDPA GDPGADVPSI GATNWQGGLA ATRHLVDLGH TRIGAISGPT
210 220 230 240 250
RMMCSRARVD GYRAALETAG LPVDPGLIVT GDFHHEAGYR QGLELLRRPD
260 270 280 290 300
RPTAVFAGND LQALGLYEAA RELGLRIPHD LSVVGFDDLP VARWVGPPLT
310 320 330 340 350
TVRQPLMEMA EAAARLVLDL GREDRSSTAT RVELATSLEV RSSTAPPREG

RDVAG
Length:355
Mass (Da):38,134
Last modified:November 1, 1998 - v1
Checksum:iCA448231C7E84105
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939121 Genomic DNA. Translation: CAA20410.1.
PIRiT35583.
RefSeqiNP_628912.1. NC_003888.3.
WP_011029843.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA20410; CAA20410; CAA20410.
GeneIDi1100195.
KEGGisco:SCO4754.
PATRICi23739332. VBIStrCoe124346_4826.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939121 Genomic DNA. Translation: CAA20410.1.
PIRiT35583.
RefSeqiNP_628912.1. NC_003888.3.
WP_011029843.1. NC_003888.3.

3D structure databases

ProteinModelPortaliO86795.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO4754.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAA20410; CAA20410; CAA20410.
GeneIDi1100195.
KEGGisco:SCO4754.
PATRICi23739332. VBIStrCoe124346_4826.

Phylogenomic databases

eggNOGiENOG4105ETE. Bacteria.
COG1609. LUCA.
HOGENOMiHOG000220179.
InParanoidiO86795.
KOiK17640.
OMAiSAWAMEV.
OrthoDBiPOG091H01VT.
PhylomeDBiO86795.

Family and domain databases

CDDicd01392. HTH_LacI. 1 hit.
Gene3Di1.10.260.40. 1 hit.
InterProiIPR000843. HTH_LacI.
IPR010982. Lambda_DNA-bd_dom.
IPR028082. Peripla_BP_I.
[Graphical view]
PfamiPF00356. LacI. 1 hit.
[Graphical view]
SMARTiSM00354. HTH_LACI. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
PROSITEiPS50932. HTH_LACI_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO86795_STRCO
AccessioniPrimary (citable) accession number: O86795
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: November 30, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.