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Protein
Submitted name:

Transcriptional regulatory protein

Gene

SCO5656

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi40 – 59H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulatory proteinImported
Gene namesi
Ordered Locus Names:SCO5656Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO5656.

Structurei

3D structure databases

ProteinModelPortaliO86743.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 81HTH asnC-typeInterPro annotationAdd BLAST61

Phylogenomic databases

eggNOGiENOG4108UNB. Bacteria.
COG1522. LUCA.
HOGENOMiHOG000115326.
KOiK03718.
OMAiGDHMIMA.
OrthoDBiPOG091H02L8.
PhylomeDBiO86743.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR000485. AsnC-type_HTH_dom.
IPR011008. Dimeric_a/b-barrel.
IPR019888. Tscrpt_reg_AsnC-typ.
IPR019887. Tscrpt_reg_AsnC/Lrp_C.
IPR019885. Tscrpt_reg_HTH_AsnC-type_CS.
IPR036388. WH-like_DNA-bd_sf.
IPR036390. WH_DNA-bd_sf.
PfamiView protein in Pfam
PF01037. AsnC_trans_reg. 1 hit.
PF13404. HTH_AsnC-type. 1 hit.
PRINTSiPR00033. HTHASNC.
SMARTiView protein in SMART
SM00344. HTH_ASNC. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF54909. SSF54909. 1 hit.
PROSITEiView protein in PROSITE
PS00519. HTH_ASNC_1. 1 hit.
PS50956. HTH_ASNC_2. 1 hit.

Sequencei

Sequence statusi: Complete.

O86743-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASRSADQKD SRESRNGGPQ LDAVSLAIIE QLQEDGRRPY AAIGKAVGLS
60 70 80 90 100
EAAVRQRVQK LLDQGVMQIV AVTDPLTVGF RRQAMVGVNV EGDVESVAEA
110 120 130 140 150
LSAMSECEYV VMTAGSFDLM VEVVCEDDDH LLEVINRRIR AVPGVRSTES
160
FVYMKLKKQT YMWGTR
Length:166
Mass (Da):18,295
Last modified:November 1, 1998 - v1
Checksum:iBC5E19B6FF6EBABE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939124 Genomic DNA. Translation: CAA19896.1.
PIRiT35442.
RefSeqiNP_629786.1. NC_003888.3.
WP_011030367.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA19896; CAA19896; CAA19896.
GeneIDi1101095.
29659727.
KEGGisco:SCO5656.
PATRICifig|100226.15.peg.5740.

Similar proteinsi

Entry informationi

Entry nameiO86743_STRCO
AccessioniPrimary (citable) accession number: O86743
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: October 25, 2017
This is version 108 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported