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Protein
Submitted name:

Transcriptional regulatory protein

Gene

SCO5656

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi40 – 59H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulatory proteinImported
Gene namesi
Ordered Locus Names:SCO5656Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO5656

Structurei

3D structure databases

ProteinModelPortaliO86743
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 81HTH asnC-typeInterPro annotationAdd BLAST61

Phylogenomic databases

eggNOGiENOG4108UNB Bacteria
COG1522 LUCA
HOGENOMiHOG000115326
KOiK03718
OMAiGDHMIMA
OrthoDBiPOG091H02L8
PhylomeDBiO86743

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR000485 AsnC-type_HTH_dom
IPR011008 Dimeric_a/b-barrel
IPR019888 Tscrpt_reg_AsnC-typ
IPR019887 Tscrpt_reg_AsnC/Lrp_C
IPR019885 Tscrpt_reg_HTH_AsnC-type_CS
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF01037 AsnC_trans_reg, 1 hit
PF13404 HTH_AsnC-type, 1 hit
PRINTSiPR00033 HTHASNC
SMARTiView protein in SMART
SM00344 HTH_ASNC, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
SSF54909 SSF54909, 1 hit
PROSITEiView protein in PROSITE
PS00519 HTH_ASNC_1, 1 hit
PS50956 HTH_ASNC_2, 1 hit

Sequencei

Sequence statusi: Complete.

O86743-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASRSADQKD SRESRNGGPQ LDAVSLAIIE QLQEDGRRPY AAIGKAVGLS
60 70 80 90 100
EAAVRQRVQK LLDQGVMQIV AVTDPLTVGF RRQAMVGVNV EGDVESVAEA
110 120 130 140 150
LSAMSECEYV VMTAGSFDLM VEVVCEDDDH LLEVINRRIR AVPGVRSTES
160
FVYMKLKKQT YMWGTR
Length:166
Mass (Da):18,295
Last modified:November 1, 1998 - v1
Checksum:iBC5E19B6FF6EBABE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939124 Genomic DNA Translation: CAA19896.1
PIRiT35442
RefSeqiNP_629786.1, NC_003888.3
WP_011030367.1, NC_003888.3

Genome annotation databases

EnsemblBacteriaiCAA19896; CAA19896; CAA19896
GeneIDi1101095
KEGGisco:SCO5656
PATRICifig|100226.15.peg.5740

Similar proteinsi

Entry informationi

Entry nameiO86743_STRCO
AccessioniPrimary (citable) accession number: O86743
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: May 23, 2018
This is version 110 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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