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Protein
Submitted name:

Transcriptional regulatory protein

Gene

SCO5656

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulatory proteinImported
Gene namesi
Ordered Locus Names:SCO5656Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO5656.

Structurei

3D structure databases

ProteinModelPortaliO86743.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini21 – 8161HTH asnC-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 3 HTH asnC-type DNA-binding domains.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108UNB. Bacteria.
COG1522. LUCA.
HOGENOMiHOG000115326.
KOiK03718.
OMAiTETFVYL.
OrthoDBiEOG6F29D2.
PhylomeDBiO86743.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.30.70.920. 1 hit.
InterProiIPR000485. AsnC-type_HTH_dom.
IPR011008. Dimeric_a/b-barrel.
IPR019888. Tscrpt_reg_AsnC-typ.
IPR019887. Tscrpt_reg_AsnC/Lrp_C.
IPR019885. Tscrpt_reg_HTH_AsnC-type_CS.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01037. AsnC_trans_reg. 1 hit.
PF13404. HTH_AsnC-type. 1 hit.
[Graphical view]
PRINTSiPR00033. HTHASNC.
SMARTiSM00344. HTH_ASNC. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF54909. SSF54909. 1 hit.
PROSITEiPS00519. HTH_ASNC_1. 1 hit.
PS50956. HTH_ASNC_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O86743-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASRSADQKD SRESRNGGPQ LDAVSLAIIE QLQEDGRRPY AAIGKAVGLS
60 70 80 90 100
EAAVRQRVQK LLDQGVMQIV AVTDPLTVGF RRQAMVGVNV EGDVESVAEA
110 120 130 140 150
LSAMSECEYV VMTAGSFDLM VEVVCEDDDH LLEVINRRIR AVPGVRSTES
160
FVYMKLKKQT YMWGTR
Length:166
Mass (Da):18,295
Last modified:November 1, 1998 - v1
Checksum:iBC5E19B6FF6EBABE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939124 Genomic DNA. Translation: CAA19896.1.
PIRiT35442.
RefSeqiNP_629786.1. NC_003888.3.
WP_011030367.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA19896; CAA19896; CAA19896.
GeneIDi1101095.
KEGGisco:SCO5656.
PATRICi23741178. VBIStrCoe124346_5740.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939124 Genomic DNA. Translation: CAA19896.1.
PIRiT35442.
RefSeqiNP_629786.1. NC_003888.3.
WP_011030367.1. NC_003888.3.

3D structure databases

ProteinModelPortaliO86743.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO5656.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAA19896; CAA19896; CAA19896.
GeneIDi1101095.
KEGGisco:SCO5656.
PATRICi23741178. VBIStrCoe124346_5740.

Phylogenomic databases

eggNOGiENOG4108UNB. Bacteria.
COG1522. LUCA.
HOGENOMiHOG000115326.
KOiK03718.
OMAiTETFVYL.
OrthoDBiEOG6F29D2.
PhylomeDBiO86743.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.30.70.920. 1 hit.
InterProiIPR000485. AsnC-type_HTH_dom.
IPR011008. Dimeric_a/b-barrel.
IPR019888. Tscrpt_reg_AsnC-typ.
IPR019887. Tscrpt_reg_AsnC/Lrp_C.
IPR019885. Tscrpt_reg_HTH_AsnC-type_CS.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF01037. AsnC_trans_reg. 1 hit.
PF13404. HTH_AsnC-type. 1 hit.
[Graphical view]
PRINTSiPR00033. HTHASNC.
SMARTiSM00344. HTH_ASNC. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF54909. SSF54909. 1 hit.
PROSITEiPS00519. HTH_ASNC_1. 1 hit.
PS50956. HTH_ASNC_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-471 / A3(2) / M145Imported.

Entry informationi

Entry nameiO86743_STRCO
AccessioniPrimary (citable) accession number: O86743
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: May 11, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.