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Protein
Submitted name:

Putative transcriptional regulator

Gene

SCO6518

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi28 – 49H-T-H motifPROSITE-ProRule annotationAdd BLAST22
DNA bindingi76 – 99H-T-H motifPROSITE-ProRule annotationAdd BLAST24

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative transcriptional regulatorImported
Gene namesi
Ordered Locus Names:SCO6518Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO6518.

Structurei

3D structure databases

ProteinModelPortaliO86700.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 109HTH araC/xylS-type DNA-bindingInterPro annotationAdd BLAST99

Phylogenomic databases

eggNOGiENOG4108UPJ. Bacteria.
COG2207. LUCA.
HOGENOMiHOG000252408.
InParanoidiO86700.
OMAiARDTMDR.
OrthoDBiPOG091H039M.
PhylomeDBiO86700.

Family and domain databases

InterProiView protein in InterPro
IPR009057. Homeobox-like.
IPR018060. HTH_AraC.
PfamiView protein in Pfam
PF12833. HTH_18. 1 hit.
SMARTiView protein in SMART
SM00342. HTH_ARAC. 1 hit.
SUPFAMiSSF46689. SSF46689. 2 hits.
PROSITEiView protein in PROSITE
PS01124. HTH_ARAC_FAMILY_2. 1 hit.

Sequencei

Sequence statusi: Complete.

O86700-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTLEDLARL RRARDLMDRE YAEPLDVPAL ARVALMSAGH FSRSFRAAYG
60 70 80 90 100
ETPYSYLMTR RIERAMALLR RGDMSVTEVC FAVGCTSLGS FSSRFTELVG
110 120 130 140 150
ESPSAYRERD HADGAALPAC VAKVYTRPVR NGEPGRSGTP AGKSESVRNG
160
EAAPAPPPVA
Length:160
Mass (Da):17,356
Last modified:November 1, 1998 - v1
Checksum:i04CB76E1B12A8145
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939128 Genomic DNA. Translation: CAA20615.1.
PIRiT35210.
RefSeqiNP_630599.1. NC_003888.3.
WP_011030981.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA20615; CAA20615; CAA20615.
GeneIDi1101957.
KEGGisco:SCO6518.
PATRICi23742949. VBIStrCoe124346_6621.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939128 Genomic DNA. Translation: CAA20615.1.
PIRiT35210.
RefSeqiNP_630599.1. NC_003888.3.
WP_011030981.1. NC_003888.3.

3D structure databases

ProteinModelPortaliO86700.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO6518.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAA20615; CAA20615; CAA20615.
GeneIDi1101957.
KEGGisco:SCO6518.
PATRICi23742949. VBIStrCoe124346_6621.

Phylogenomic databases

eggNOGiENOG4108UPJ. Bacteria.
COG2207. LUCA.
HOGENOMiHOG000252408.
InParanoidiO86700.
OMAiARDTMDR.
OrthoDBiPOG091H039M.
PhylomeDBiO86700.

Family and domain databases

InterProiView protein in InterPro
IPR009057. Homeobox-like.
IPR018060. HTH_AraC.
PfamiView protein in Pfam
PF12833. HTH_18. 1 hit.
SMARTiView protein in SMART
SM00342. HTH_ARAC. 1 hit.
SUPFAMiSSF46689. SSF46689. 2 hits.
PROSITEiView protein in PROSITE
PS01124. HTH_ARAC_FAMILY_2. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiO86700_STRCO
AccessioniPrimary (citable) accession number: O86700
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: May 10, 2017
This is version 104 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.