Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Putative transcriptional regulator

Gene

SCO6349

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi28 – 47H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative transcriptional regulatorImported
Gene namesi
Ordered Locus Names:SCO6349Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiO86618.

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO6349.

Structurei

3D structure databases

ProteinModelPortaliO86618.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini26 – 80HTH lacI-type DNA-bindingInterPro annotationAdd BLAST55

Phylogenomic databases

eggNOGiENOG4105ETE. Bacteria.
COG1609. LUCA.
HOGENOMiHOG000220179.
InParanoidiO86618.
OMAiIFTGNDQ.
OrthoDBiPOG091H01VT.
PhylomeDBiO86618.

Family and domain databases

CDDicd01392. HTH_LacI. 1 hit.
InterProiView protein in InterPro
IPR000843. HTH_LacI.
IPR010982. Lambda_DNA-bd_dom.
IPR028082. Peripla_BP_I.
PfamiView protein in Pfam
PF00356. LacI. 1 hit.
SMARTiView protein in SMART
SM00354. HTH_LACI. 1 hit.
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
PROSITEiView protein in PROSITE
PS50932. HTH_LACI_2. 1 hit.

Sequencei

Sequence statusi: Complete.

O86618-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSETPAADG APVSRRTADD GAARQPGMAD VARLAGVSAQ TVSRTLAGHP
60 70 80 90 100
NVQHTTRAKV LAAVEELGYR KNNAARMLSS GRSRTIGVVT LRTTFYSRAN
110 120 130 140 150
LLFGIEAAAR EAGYAVSTAA TASLDTAAIE SALSRLAEQD VEGVVLSVPL
160 170 180 190 200
VHVSPRIERL TRSVPTVTVD GSRTPATEIV AVDQTLAARL ATRHLIELGH
210 220 230 240 250
KAVWHVSGPQ EWLDAASRCA GWRDTLEEAG LSVPPVLEGD WTPASGYRNG
260 270 280 290 300
LVLGKIPDVT AVFVASDEMA FGVIRALHEL GRRVPEDISV VGVDDIALAE
310 320 330 340 350
YCSPSLTTVA QPFAEMGALA VAHLLRHIAD PDAAPEPASV EPVLVVRAST
360
AAVDGPAARR S
Length:361
Mass (Da):37,832
Last modified:November 1, 1998 - v1
Checksum:iAAD404BE5EC0A016
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939127 Genomic DNA. Translation: CAA20080.1.
PIRiT29437.
RefSeqiNP_630441.1. NC_003888.3.
WP_003972576.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA20080; CAA20080; CAA20080.
GeneIDi1101790.
29657191.
KEGGisco:SCO6349.
PATRICifig|100226.15.peg.6461.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiO86618_STRCO
AccessioniPrimary (citable) accession number: O86618
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: June 7, 2017
This is version 103 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported