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Protein
Submitted name:

Putative transcriptional regulator

Gene

SCO6334

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative transcriptional regulatorImported
Gene namesi
Ordered Locus Names:SCO6334Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO6334.

Structurei

3D structure databases

ProteinModelPortaliO86603.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini825 – 890HTH luxR-type DNA-bindingInterPro annotationAdd BLAST66

Sequence similaritiesi

Contains 1 HTH luxR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG41061ZR. Bacteria.
COG2909. LUCA.
HOGENOMiHOG000269068.
InParanoidiO86603.
KOiK03556.
OMAiNGRCMIG.
OrthoDBiPOG091H0FN0.

Family and domain databases

CDDicd06170. LuxR_C_like. 1 hit.
Gene3Di1.10.10.10. 1 hit.
1.25.40.10. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR011990. TPR-like_helical_dom.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O86603-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGPSDGTGRS PADTGTDPLG GPYLRTRFVL PSRPATFLRR QRLIVHLNQA
60 70 80 90 100
LRSPLTVVNG AAGAGKTLLT ADWAAGLRVP TAWLTVETGD HPPGVFWAYV
110 120 130 140 150
FESLRVCGAR AGDTPGAPAD PSGVGQRLLA SLAAELNALD SPVVLVLDEY
160 170 180 190 200
DRMTNPEIAE QLEFVLHHAG QGLRLVLVTR TEPLLPLHRY RASGELTEVR
210 220 230 240 250
GSELSFTTEE AGALLRLHGL QLPEYAASAL VDRTRGWAAG LRLSALAARE
260 270 280 290 300
STDPERYLKE FEADHSTVAD FLLAEVLKGR TQEEQDLLLR VSVLDRFCPD
310 320 330 340 350
LADALTQRTD AGLLLAGLHR ENAFIERLEH SWYRLHPLFR EILRAHLRER
360 370 380 390 400
LPGVEPELHL RAARWLRRSG FLPETLAHGA AGGDFDLAAG ALVDDLALGQ
410 420 430 440 450
LFTGLRSDAL AQLFAGMGPE ARSPASDLVR TAQALARRDV AQGLNRLRQA
460 470 480 490 500
RNHLSDAGNS PGLAAARLSC ALLEALAARL TGCPSRAEQA AATAEELRQE
510 520 530 540 550
LPDHLLDEHP ELSALLMTHV GSARLWEGRF DDARAVLTRV AGAPGGFTTV
560 570 580 590 600
LPRVESMGHL ALLDYLTGWL GRAERRALAA VSEAERAGLP RPPGAGLGRL
610 620 630 640 650
VLAAVAVDRQ ELGRARVLLD ETARLPAREH DPVPTAGRAL AVSRLLLDVG
660 670 680 690 700
ETDAAAKAAE PAVSTAVVSP WAEGQAAVAR SAACLADGRP DEAVRLLQSV
710 720 730 740 750
GGDQPVCAVE AAGIQVAAGR PRAAAELLGA VRAGGRAGPA VSVGAALVRA
760 770 780 790 800
RLAQESGDTV AACRLVARAL LDARREHLRR PFLQAGDWIE PLLATAPLHD
810 820 830 840 850
LAEGWLPSGR PPAHGEPVRP GADPAFLVPV ELSGRERDVL RRLARMMSTE
860 870 880 890
EIAADLYVSI NTVKTHLKSA YRKLAVNRRG DAVRRARDLG LL
Length:892
Mass (Da):95,411
Last modified:November 1, 1998 - v1
Checksum:i8DB095537B76CB1A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939127 Genomic DNA. Translation: CAA20065.1.
PIRiT29420.
RefSeqiNP_630426.1. NC_003888.3.
WP_011030835.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA20065; CAA20065; CAA20065.
GeneIDi1101775.
KEGGisco:SCO6334.
PATRICi23742598. VBIStrCoe124346_6446.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939127 Genomic DNA. Translation: CAA20065.1.
PIRiT29420.
RefSeqiNP_630426.1. NC_003888.3.
WP_011030835.1. NC_003888.3.

3D structure databases

ProteinModelPortaliO86603.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO6334.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAA20065; CAA20065; CAA20065.
GeneIDi1101775.
KEGGisco:SCO6334.
PATRICi23742598. VBIStrCoe124346_6446.

Phylogenomic databases

eggNOGiENOG41061ZR. Bacteria.
COG2909. LUCA.
HOGENOMiHOG000269068.
InParanoidiO86603.
KOiK03556.
OMAiNGRCMIG.
OrthoDBiPOG091H0FN0.

Family and domain databases

CDDicd06170. LuxR_C_like. 1 hit.
Gene3Di1.10.10.10. 1 hit.
1.25.40.10. 1 hit.
3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR011990. TPR-like_helical_dom.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO86603_STRCO
AccessioniPrimary (citable) accession number: O86603
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: September 7, 2016
This is version 103 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.