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Protein
Submitted name:

Putative transcriptional regulator

Gene

SCO5550

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative transcriptional regulatorImported
Gene namesi
Ordered Locus Names:SCO5550Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO5550.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2DG6X-ray2.20A1-214[»]
ProteinModelPortaliO86531.
SMRiO86531. Positions 1-214.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO86531.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 7070HTH merR-type DNA-bindingInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4105NJF. Bacteria.
ENOG4111WQB. LUCA.
HOGENOMiHOG000268958.
OMAiTATIKYY.
OrthoDBiEOG6JB17P.

Family and domain databases

InterProiIPR009061. DNA-bd_dom_put.
IPR000551. MerR-type_HTH_dom.
[Graphical view]
PfamiPF13411. MerR_1. 1 hit.
[Graphical view]
PRINTSiPR00040. HTHMERR.
SMARTiSM00422. HTH_MERR. 1 hit.
[Graphical view]
SUPFAMiSSF46955. SSF46955. 1 hit.
PROSITEiPS50937. HTH_MERR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O86531-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLADLSKRS GVSTATIKYY LREGLLPPGR QVNATTAEYD EDHLRRLRLV
60 70 80 90 100
RALIQVGKVP VATAREVLGH VDDDSLGRTV RLGAALWALP QDAEPDEADP
110 120 130 140 150
AVAAARVEVD RLLELLGWET SRELAPLSPV HRSLVVAVAA LRRLDYPWDA
160 170 180 190 200
ELMAPYGELM MEVARRDLDF METHASEAEK VEMAVAAAVL FQPVLRALHR
210
LAQEEESARR YGIE
Length:214
Mass (Da):23,827
Last modified:November 1, 1998 - v1
Checksum:i54F5793CD1160746
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939124 Genomic DNA. Translation: CAA19998.1.
PIRiT29080.
RefSeqiNP_629684.1. NC_003888.3.
WP_003973445.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA19998; CAA19998; CAA19998.
GeneIDi1100990.
KEGGisco:SCO5550.
PATRICi23740974. VBIStrCoe124346_5638.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939124 Genomic DNA. Translation: CAA19998.1.
PIRiT29080.
RefSeqiNP_629684.1. NC_003888.3.
WP_003973445.1. NC_003888.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2DG6X-ray2.20A1-214[»]
ProteinModelPortaliO86531.
SMRiO86531. Positions 1-214.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO5550.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAA19998; CAA19998; CAA19998.
GeneIDi1100990.
KEGGisco:SCO5550.
PATRICi23740974. VBIStrCoe124346_5638.

Phylogenomic databases

eggNOGiENOG4105NJF. Bacteria.
ENOG4111WQB. LUCA.
HOGENOMiHOG000268958.
OMAiTATIKYY.
OrthoDBiEOG6JB17P.

Miscellaneous databases

EvolutionaryTraceiO86531.

Family and domain databases

InterProiIPR009061. DNA-bd_dom_put.
IPR000551. MerR-type_HTH_dom.
[Graphical view]
PfamiPF13411. MerR_1. 1 hit.
[Graphical view]
PRINTSiPR00040. HTHMERR.
SMARTiSM00422. HTH_MERR. 1 hit.
[Graphical view]
SUPFAMiSSF46955. SSF46955. 1 hit.
PROSITEiPS50937. HTH_MERR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-471 / A3(2) / M145Imported.
  2. "Crystal structure of the putative transcriptional regulator SCO5550 from Streptomyces coelicolor A3(2)."
    Hayashi T., Tanaka Y., Sakai N., Yao M., Tamura T., Tanaka I.
    Submitted (MAR-2006) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.20 ANGSTROMS).

Entry informationi

Entry nameiO86531_STRCO
AccessioniPrimary (citable) accession number: O86531
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: March 16, 2016
This is version 96 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.