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Protein
Submitted name:

Putative secreted lyase

Gene

SCO5534

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei152N-acetyl-D-glucosamineCombined sources1
Binding sitei264N-acetyl-D-glucosamineCombined sources1
Binding sitei318N-acetyl-D-glucosamineCombined sources1
Binding sitei322N-acetyl-D-glucosamineCombined sources1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLyaseImported

Protein family/group databases

CAZyiPL8. Polysaccharide Lyase Family 8.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative secreted lyaseImported
Gene namesi
Ordered Locus Names:SCO5534Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 32Sequence analysisAdd BLAST32
ChainiPRO_500416025833 – 776Sequence analysisAdd BLAST744

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO5534.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2WCOX-ray1.94A33-776[»]
2WDAX-ray2.30A33-776[»]
2X03X-ray2.30A/B33-776[»]
ProteinModelPortaliO86516.
SMRiO86516.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO86516.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini45 – 367Lyase_8_NInterPro annotationAdd BLAST323
Domaini409 – 651Lyase_8InterPro annotationAdd BLAST243
Domaini666 – 728Lyase_8_CInterPro annotationAdd BLAST63

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410XTFC. LUCA.
HOGENOMiHOG000243554.
InParanoidiO86516.
KOiK01727.
OMAiRYYQDET.
OrthoDBiPOG091H03FL.
PhylomeDBiO86516.

Family and domain databases

Gene3Di1.50.10.100. 1 hit.
2.60.220.10. 1 hit.
2.70.98.10. 1 hit.
InterProiView protein in InterPro
IPR008929. Chondroitin_lyas.
IPR011013. Gal_mutarotase_sf_dom.
IPR014718. GH-type_carb-bd.
IPR011071. Lyase_8-like_C.
IPR012970. Lyase_8_alpha_N.
IPR004103. Lyase_8_C.
IPR003159. Lyase_8_central_dom.
IPR006311. TAT_signal.
PfamiView protein in Pfam
PF02278. Lyase_8. 1 hit.
PF02884. Lyase_8_C. 1 hit.
PF08124. Lyase_8_N. 1 hit.
SUPFAMiSSF48230. SSF48230. 1 hit.
SSF49863. SSF49863. 1 hit.
SSF74650. SSF74650. 1 hit.
PROSITEiView protein in PROSITE
PS51318. TAT. 1 hit.

Sequencei

Sequence statusi: Complete.

O86516-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTPQRPTAPS RRAVLLAAAA AAALTTVPRA AAATADPYDA LRRRWLGITL
60 70 80 90 100
GTGYDPAAEP YASRLAETGE RAREHRATMA PTPTSLWPGH PFDPPAGITF
110 120 130 140 150
AYGRLWTMTE AYVQEGTGAT GDPALLADIL RGLDHLSATV YHPATTRYGN
160 170 180 190 200
WWEWQIGSPR LLMDITAALY DHLGADRVAA ACAAVDHFVP DAMLGAYTGT
210 220 230 240 250
STGANRVDLC RSVALRGVLG RAPAKIALAR DALSPVFPYV TKGDGLYADG
260 270 280 290 300
SFVQHTWVAY SGTYGQVMLD GLGRLFTLLA GSEWEVTDPG RQLVLDSVEH
310 320 330 340 350
AYAPLIHDGL VMDTVNGRAI SRGYLKSDDL HVMRSDHFHG QQLIAAMAVL
360 370 380 390 400
AGGASNAERE RWHARIKGWI ERDTVTPVLT APQFPVADLT RLHAIADAPG
410 420 430 440 450
EAAPEPVGHH LFAAMDRAVH RRPAFTAGLA MASDRIAHYE CGNGENPRGW
460 470 480 490 500
HTGAGMLTWW ANGTRADQYT DWFWPTVDWY RLPGTTVSTK RLADRAGGEW
510 520 530 540 550
GAPKPDVRWV GGATDGEYAA VGQHLKGLGS TLEARKSWFF LDDAVVCLGA
560 570 580 590 600
GITCADGVPV ETVVDNRNLG EGGTQALVRG RHWAHLEGHG GWIVPGGALR
610 620 630 640 650
TLREDRTGAW SDINTTSTTE RRTRRWQTLW LDHGTDPAGA DYVYTVMPGA
660 670 680 690 700
SRAALARRAA DRHWLTVLAN DDRRQAVSVP SLGLTAANFW QAGTAGPLTT
710 720 730 740 750
TAGASVLVRR RGRTATLRVS EPPRTGEALE IVWDHPVGAV LRADETVEIL
760 770
ATGRRLHLRV TPGVVCTTHE CEVTLS
Length:776
Mass (Da):83,774
Last modified:November 1, 1998 - v1
Checksum:iDE861687595B29E1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939124 Genomic DNA. Translation: CAA19982.1.
PIRiT29064.
RefSeqiNP_629668.1. NC_003888.3.
WP_011030298.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA19982; CAA19982; CAA19982.
GeneIDi1100974.
KEGGisco:SCO5534.
PATRICifig|100226.15.peg.5621.

Similar proteinsi

Entry informationi

Entry nameiO86516_STRCO
AccessioniPrimary (citable) accession number: O86516
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: November 22, 2017
This is version 101 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported