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Protein
Submitted name:

Putative transcriptional regulator

Gene

SCO5528

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative transcriptional regulatorImported
Gene namesi
Ordered Locus Names:SCO5528Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO5528.

Structurei

3D structure databases

ProteinModelPortaliO86510.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 69HTH tetR-type DNA-bindingInterPro annotationAdd BLAST61

Sequence similaritiesi

Contains 1 HTH tetR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG4106DWG. Bacteria.
ENOG410Y5IF. LUCA.
HOGENOMiHOG000053879.
InParanoidiO86510.
OMAiENDIQEC.
OrthoDBiPOG091H02BD.
PhylomeDBiO86510.

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O86510-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGGGRRQAP PREDVLAAAM EMIAERGLEK LTMAALGREV GMSSGHLLYY
60 70 80 90 100
FGSKDELLLR TLEWSEGRLG AERGRLLTRP GTARERLGAY VDLYVPDGHR
110 120 130 140 150
DPHWTLWLEV WNHSQNAPDE ARDRQAAIEG AWHRDLTALL AEGISRGEFR
160 170 180 190 200
AVDPDRFASR LRALLDGFAI HVAIGLRGTD RAQVLGHVRD FLADGLYGRD
Length:200
Mass (Da):22,281
Last modified:November 1, 1998 - v1
Checksum:i546EC930F53DE1A5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939124 Genomic DNA. Translation: CAA19976.1.
PIRiT29058.
RefSeqiNP_629662.1. NC_003888.3.
WP_003973468.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAA19976; CAA19976; CAA19976.
GeneIDi1100968.
KEGGisco:SCO5528.
PATRICi23740918. VBIStrCoe124346_5615.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939124 Genomic DNA. Translation: CAA19976.1.
PIRiT29058.
RefSeqiNP_629662.1. NC_003888.3.
WP_003973468.1. NC_003888.3.

3D structure databases

ProteinModelPortaliO86510.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO5528.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAA19976; CAA19976; CAA19976.
GeneIDi1100968.
KEGGisco:SCO5528.
PATRICi23740918. VBIStrCoe124346_5615.

Phylogenomic databases

eggNOGiENOG4106DWG. Bacteria.
ENOG410Y5IF. LUCA.
HOGENOMiHOG000053879.
InParanoidiO86510.
OMAiENDIQEC.
OrthoDBiPOG091H02BD.
PhylomeDBiO86510.

Family and domain databases

Gene3Di1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
[Graphical view]
PfamiPF00440. TetR_N. 1 hit.
[Graphical view]
PRINTSiPR00455. HTHTETR.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiO86510_STRCO
AccessioniPrimary (citable) accession number: O86510
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: November 30, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.