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Protein
Submitted name:

Biphenyl dioxygenase alpha subunit

Gene

bphA1

Organism
Burkholderia sp. JB1
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. 2 iron, 2 sulfur cluster binding Source: UniProtKB-KW
  2. iron ion binding Source: InterPro
  3. oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor Source: InterPro

GO - Biological processi

  1. aromatic compound catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DioxygenaseImported, Oxidoreductase

Keywords - Ligandi

2Fe-2SUniRule annotation, Iron, Iron-sulfur, Metal-binding

Enzyme and pathway databases

BRENDAi1.14.12.18. 260532.

Names & Taxonomyi

Protein namesi
Submitted name:
Biphenyl dioxygenase alpha subunitImported
Gene namesi
Name:bphA1Imported
OrganismiBurkholderia sp. JB1Imported
Taxonomic identifieri80621 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia

Structurei

3D structure databases

ProteinModelPortaliO86136.
SMRiO86136. Positions 18-453.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 Rieske domain.UniRule annotation

Family and domain databases

Gene3Di2.102.10.10. 1 hit.
3.90.380.10. 1 hit.
InterProiIPR017941. Rieske_2Fe-2S.
IPR015881. Ring-hydroxy_dOase_2Fe2S_BS.
IPR015879. Ring_hydroxy_dOase_asu_C_dom.
IPR001663. Rng_hydr_dOase-A.
[Graphical view]
PfamiPF00355. Rieske. 1 hit.
PF00848. Ring_hydroxyl_A. 1 hit.
[Graphical view]
PRINTSiPR00090. RNGDIOXGNASE.
SUPFAMiSSF50022. SSF50022. 1 hit.
PROSITEiPS51296. RIESKE. 1 hit.
PS00570. RING_HYDROXYL_ALPHA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O86136-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSSTMKDTQE APVRWSRNWT PDAIRALVDQ DNGKLDARIY ADQDLYQLEL
60 70 80 90 100
ERVFGRSWLM LGHETHIPKI GDYLTTYMGE DPVIMVRQKD QSIKVFLNQC
110 120 130 140 150
RHRGMRIVRS DGGNAKAFTC TYHGWAYDIA GNLVNVPFEK EAFCDKKEGD
160 170 180 190 200
CGFDKADWGP LQARVETYKG LVFANWDPEA PDLKTYLSDA MPYMDVMLDR
210 220 230 240 250
TEAGTEAIGG IQKWVIPCNW KFAAEQFCSD MYHAGTMSHL SGVLAGLPPE
260 270 280 290 300
MDLTQIQLSK NGNQFRSAWG GHGAGWFIND SSILLSVMGP KITQYWTQGP
310 320 330 340 350
AAEKAASVPQ LPILDMFGQH MTVFPTCSFL PGINTIRTWH PRGPNEVEVW
360 370 380 390 400
AFVLVDADAP EDIKEEFRLQ NIRTFNAGVF EQDDGENWVE IQRVMRGHKA
410 420 430 440 450
KSTFAVPKMG LNVPNKNNPA YPGKTAYVYA EEARGMYHHW SRMMSEPSWD

TLKP
Length:454
Mass (Da):51,410
Last modified:November 1, 1998 - v1
Checksum:i3D8F906E3AEF9DDF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ010057 Genomic DNA. Translation: CAA08985.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ010057 Genomic DNA. Translation: CAA08985.1.

3D structure databases

ProteinModelPortaliO86136.
SMRiO86136. Positions 18-453.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Enzyme and pathway databases

BRENDAi1.14.12.18. 260532.

Family and domain databases

Gene3Di2.102.10.10. 1 hit.
3.90.380.10. 1 hit.
InterProiIPR017941. Rieske_2Fe-2S.
IPR015881. Ring-hydroxy_dOase_2Fe2S_BS.
IPR015879. Ring_hydroxy_dOase_asu_C_dom.
IPR001663. Rng_hydr_dOase-A.
[Graphical view]
PfamiPF00355. Rieske. 1 hit.
PF00848. Ring_hydroxyl_A. 1 hit.
[Graphical view]
PRINTSiPR00090. RNGDIOXGNASE.
SUPFAMiSSF50022. SSF50022. 1 hit.
PROSITEiPS51296. RIESKE. 1 hit.
PS00570. RING_HYDROXYL_ALPHA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Substrate specificity of the (chloro)biphenyl degradation pathway of Burkholderia strain JB1."
    Dignum M., Parsons J.R., van Thor J.J., Hellingwerf K.J.
    Submitted (AUG-1998) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: JB1Imported.

Entry informationi

Entry nameiO86136_9BURK
AccessioniPrimary (citable) accession number: O86136
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: October 29, 2014
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.