O86135 (O86135_BORPT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Tracheal colonization factor EMBL CAA08832.2

Submitted name:
Tracheal colonization factor A EMBL CAJ87644.1

Gene names

Name:	tcfA2 EMBL CAA08832.2
Synonyms:	tcfA EMBL CAJ87644.1

Organism

Bordetella pertussis EMBL CAA08832.2

Taxonomic identifier

520 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella

Protein attributes

Sequence length	647 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL CAA08832.2
Gene Ontology (GO)
Biological_process	cell adhesion Inferred from electronic annotation. Source: InterPro
Cellular_component	outer membrane Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 39	39	Potential EMBL CAA08832.2
	Chain	40 – 647	608	tracheal colonization factor EMBL CAA08832.2		PRO_5000064495

Sequences

	Sequence		Length	Mass (Da)
	O86135 [UniParc]. Last modified December 1, 2001. Version 2. Checksum: BBDE85756DDDC571	FASTA	647	66,294
	10 20 30 40 50 60 MHIYGNMNRA TPCRGAVRAL ALALLGAGMW TLSPPSAWAL KLPSLLTDDE LKLVLPTGMS 70 80 90 100 110 120 LEDFKRSLQE SAPSALATPP SSSPPVAKPG PGSVAEAPSG SGHKDNPSPP VVGVGPGMAE 130 140 150 160 170 180 SSGGHNPGVG GGTHENGLPG IGKVGGSAPG PDTSTGSGPD AGMASGAGST SPGASGGAGK 190 200 210 220 230 240 DAMPPSEGER PDSGMSDSGR GGESSAGGLN PDGAGKPPRE EGEPGSKSPA DGGQDGPPPP 250 260 270 280 290 300 RDGGDADPQP PRDDGNGEQQ PPKGGGDEGQ RPPPAAGNGG NGGNGNAQLP ERGDDAGPKP 310 320 330 340 350 360 PEGEGGDEGP QPPQGGGEQD APEVPPVAPA PPAGNGVYDP GTHTLTTPAS AAVSLASSSH 370 380 390 400 410 420 GVWQAEMNAL SKRMGELRLT PVAGGVWGRA FGRRQDVDNR VSREFRQTIS GFELGADTAL 430 440 450 460 470 480 PVADGRWHVG AVAGYTNGRI KFDRGGTGDD DSVHVGAYAT YIEDGGFYMD GIVRVSRIRH 490 500 510 520 530 540 AFKVDDAKGR RVRGQYRGNG VGASLELGKR FTWPGAWYVE PQLEVAAFHA QGADYTASNG 550 560 570 580 590 600 LRIKDDGTNS MLGRLGLHVG RQFDLGDGRV VQPYMKLSWV QEFDGKGTVR TNDIRHKVRL 610 620 630 640 DGGRTELAVG VASQLGKHGS LFGSYEYAKG SRQTMPWTFH VGYRYAW

References

[1]	"Tracheal colonization factor: a Bordetella pertussis secreted virulence determinant." Finn T.M., Stevens L.A. Mol. Microbiol. 16:625-634(1995) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: B596 EMBL CAA08832.2.
[2]	van Loo I. Submitted (OCT-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: B596 EMBL CAA08832.2.
[3]	"Multilocus sequence typing of Bordetella pertussis based on surface protein genes." van Loo I.H., Heuvelman K.J., King A.J., Mooi F.R. J. Clin. Microbiol. 40:1994-2001(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: B596 EMBL CAA08832.2.
[4]	"Polymorphism of tcfA." van Gent M., Mooi F.R. Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AJ009785 Genomic DNA. Translation: CAA08832.2. AM238668 Genomic DNA. Translation: CAJ87644.1.
3D structure databases
ProteinModelPortal	O86135.
ModBase	Search...
Protein-protein interaction databases
STRING	257313.BP1201.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
PATRIC	21155592. VBIBorPer7866_1295.
Phylogenomic databases
HOGENOM	HOG000115199.
ProtClustDB	CLSK266100.
Enzyme and pathway databases
BioCyc	BPER257313:BP1201-MONOMER.
Family and domain databases
InterPro	IPR005546. Auto_transptbeta. IPR006315. OM_autotransptr_brl. IPR003991. Pertactin_virulence_factor. [Graphical view]
Pfam	PF03797. Autotransporter. 1 hit. [Graphical view]
PRINTS	PR01484. PRTACTNFAMLY.
SMART	SM00869. Autotransporter. 1 hit. [Graphical view]
SUPFAM	SSF103515. Auto_transptbeta. 1 hit.
TIGRFAMs	TIGR01414. autotrans_barl. 1 hit.
PROSITE	PS51208. AUTOTRANSPORTER. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

O86135_BORPT

Accession

Primary (citable) accession number: O86135

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1998
Last sequence update:	December 1, 2001
Last modified:	May 1, 2013
This is version 71 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)