O86130 (ARGR_BACLD) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 79.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Arginine repressor | ||||||
| Gene names |
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| Organism | Bacillus licheniformis (strain DSM 13 / ATCC 14580) [Complete proteome] [HAMAP] | ||||||
| Taxonomic identifier | 279010 [NCBI] | ||||||
| Taxonomic lineage | Bacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus |
Protein attributes
| Sequence length | 149 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Regulates arginine biosynthesis genes and activates arginine deiminase pathway genes. HAMAP MF_00173 |
| Pathway | Amino-acid biosynthesis; L-arginine biosynthesis. [regulation] HAMAP MF_00173 Amino-acid degradation; L-arginine degradation via ADI pathway. HAMAP MF_00173 |
| Subcellular location | Cytoplasm Probable HAMAP MF_00173. |
| Sequence similarities | Belongs to the ArgR family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis Arginine biosynthesis Arginine metabolism Transcription Transcription regulation |
| Cellular component | Cytoplasm |
| Ligand | DNA-binding |
| Molecular function | Activator Repressor |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | arginine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependentInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activityInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||
Molecule processing | |||||||
|---|---|---|---|---|---|---|---|
| Chain | 1 – 149 | 149 | Arginine repressor HAMAP MF_00173 | PRO_0000205069 | |||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The arcABDC gene cluster, encoding the arginine deiminase pathway of Bacillus licheniformis, and its activation by the arginine repressor argR." Maghnouj A., de Sousa Cabral T.F., Stalon V., Vander Wauven C. J. Bacteriol. 180:6468-6475(1998) [PubMed: 9851988] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [2] | "The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential." Veith B., Herzberg C., Steckel S., Feesche J., Maurer K.H., Ehrenreich P., Baeumer S., Henne A., Liesegang H., Merkl R., Ehrenreich A., Gottschalk G. J. Mol. Microbiol. Biotechnol. 7:204-211(2004) [PubMed: 15383718] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 13 / ATCC 14580. |
| [3] | "Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species." Rey M.W., Ramaiya P., Nelson B.A., Brody-Karpin S.D., Zaretsky E.J., Tang M., Lopez de Leon A., Xiang H., Gusti V., Clausen I.G., Olsen P.B., Rasmussen M.D., Andersen J.T., Joergensen P.L., Larsen T.S., Sorokin A., Bolotin A., Lapidus A. Berka R.M.Genome Biol. 5:R77.1-R77.12(2004) [PubMed: 15461803] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 13 / ATCC 14580. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | Y17553 Genomic DNA. Translation: CAA76776.1. AE017333 Genomic DNA. Translation: AAU41470.1. CP000002 Genomic DNA. Translation: AAU24111.1. |
| RefSeq | YP_079749.1. NC_006270.3. YP_092163.1. NC_006322.1. |
3D structure databases | |
| ProteinModelPortal | O86130. |
| SMR | O86130. Positions 1-149. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | O86130. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | EBBACT00000058219; EBBACP00000056750; EBBACG00000058210. EBBACT00000060029; EBBACP00000058462; EBBACG00000060020. |
| GeneID | 3027539. 3100124. |
| GenomeReviews | Gene locus BLi02596 in contig AE017333_GR. Gene locus BL01521 in contig CP000002_GR. |
| KEGG | bld:BLi02596. bli:BL01521. |
| NMPDR | fig|279010.5.peg.439. |
| PATRIC | 18950866. VBIBacLic203714_2635. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG1438. |
| GeneTree | EBGT00050000001828. |
| HOGENOM | HBG697909. |
| OMA | ASAIDHS. |
| ProtClustDB | PRK04280. |
Enzyme and pathway databases | |
| BioCyc | BLIC279010-1:BLI02596-MONOMER. BLIC279010:BL01521-MONOMER. |
Family and domain databases | |
| HAMAP | MF_00173. Arg_repressor. [Tree] |
| InterPro | IPR001669. Arg_repress. IPR020899. Arg_repress_C. IPR020900. Arg_repress_DNA-bd. IPR011991. WHTH_trsnscrt_rep_DNA-bd. [Graphical view] |
| Gene3D | G3DSA:1.10.10.10. Wing_hlx_DNA_bd. 1 hit. |
| KO | K03402. |
| Pfam | PF01316. Arg_repressor. 1 hit. PF02863. Arg_repressor_C. 1 hit. [Graphical view] |
| PRINTS | PR01467. ARGREPRESSOR. |
| ProDom | PD007402. Arg_repress. 1 hit. [Graphical view] [Entries sharing at least one domain] |
| SUPFAM | SSF55252. Arg_repress. 1 hit. |
| TIGRFAMs | TIGR01529. ArgR_whole. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | ARGR_BACLD | ||||||||
| Accession | Primary (citable) accession number: O86130 Secondary accession number(s): Q65HJ4 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

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