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Protein
Submitted name:

HexA

Gene

hexA

Organism
Pectobacterium carotovorum subsp. carotovorum (Erwinia carotovora subsp. carotovora)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
HexAImported
Submitted name:
Transcriptional regulatorImported
Gene namesi
Name:hexAImported
ORF Names:RD01_06855Imported
OrganismiPectobacterium carotovorum subsp. carotovorum (Erwinia carotovora subsp. carotovora)Imported
Taxonomic identifieri555 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePectobacterium
Proteomesi
  • UP000031174 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi561230.PC1_2773.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini11 – 6858HTH lysR-type DNA-bindingInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH lysR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107NQ8. Bacteria.
ENOG410XR9D. LUCA.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O85272-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTSANRPVLN LDLDLLRTFV AVADLNTFAA AATAVNRTQS AVSQQMQRLE
60 70 80 90 100
QLIGKELFAR HGRNKLLTEH GIQFLGYARK ILQFNDEACI SLMYSDIQGT
110 120 130 140 150
LTIGASDDTA DTILPYILHR VTSVFPKLSV NVSVKRSAEM MEMLNQGKID
160 170 180 190 200
LVITTMNGVV FPHVLLRSSP TLWYCAADYQ FRSQEPVPLV VLDEPSPFRT
210 220 230 240 250
LATQQLTAAG IPWRIAYVAS TLSAVRAAVK AGMGITVRSV EMMSPELRVL
260 270 280 290 300
GEEEGLPRLP ETRYFLCQNP NQENELATAI FNVIESGKPS HITPVSMLAN
310
STNEKLSSDP SLKDAI
Length:316
Mass (Da):34,810
Last modified:November 1, 1998 - v1
Checksum:i44694DAE2AE36074
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF057063 Genomic DNA. Translation: AAC38639.1.
JUJS01000001 Genomic DNA. Translation: KHT34954.1.
RefSeqiWP_039533880.1. NZ_JUJS01000001.1.

Genome annotation databases

EnsemblBacteriaiKHT34954; KHT34954; RD01_06855.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF057063 Genomic DNA. Translation: AAC38639.1.
JUJS01000001 Genomic DNA. Translation: KHT34954.1.
RefSeqiWP_039533880.1. NZ_JUJS01000001.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi561230.PC1_2773.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiKHT34954; KHT34954; RD01_06855.

Phylogenomic databases

eggNOGiENOG4107NQ8. Bacteria.
ENOG410XR9D. LUCA.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The hexA gene of Erwinia carotovora encodes a LysR homologue and regulates motility and the expression of multiple virulence determinants."
    Harris S.J., Shih Y.L., Bentley S.D., Salmond G.P.C.
    Mol. Microbiol. 28:705-717(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: ECC193Imported.
  2. Xie H., Ma R.
    Submitted (DEC-2014) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BC T5Imported.

Entry informationi

Entry nameiO85272_PECCC
AccessioniPrimary (citable) accession number: O85272
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: July 6, 2016
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.