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Protein
Submitted name:

Positive phenol-degradative gene regulator

Gene

poxR

Organism
Ralstonia sp. E2
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi151ZincCombined sources1
Metal bindingi174ZincCombined sources1
Metal bindingi177ZincCombined sources1
Metal bindingi185ZincCombined sources1

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi265 – 272ATPPROSITE-ProRule annotation8
Nucleotide bindingi328 – 337ATPPROSITE-ProRule annotation10

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation
LigandATP-bindingPROSITE-ProRule annotationSAAS annotation, Metal-bindingCombined sources, Nucleotide-binding, ZincCombined sources

Names & Taxonomyi

Protein namesi
Submitted name:
Positive phenol-degradative gene regulatorImported
Gene namesi
Name:poxRImported
OrganismiRalstonia sp. E2Imported
Taxonomic identifieri67939 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeRalstonia

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

DIPiDIP-61904N.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
5FRUX-ray1.85A/B1-211[»]
5FRVX-ray1.90A/B1-211[»]
5FRWX-ray2.10A/B1-211[»]
5FRXX-ray2.40A/B1-211[»]
5FRYX-ray1.79A/B1-211[»]
5FRZX-ray2.10A/B1-211[»]
5FS0X-ray2.40A/B1-211[»]
ProteinModelPortaliO84957.
SMRiO84957.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini237 – 466Sigma-54 factor interactionInterPro annotationAdd BLAST230

Family and domain databases

InterProiView protein in InterPro
IPR003593. AAA+_ATPase.
IPR009057. Homeobox-like.
IPR002197. HTH_Fis.
IPR024096. NO_sig/Golgi_transp_ligand-bd.
IPR027417. P-loop_NTPase.
IPR002078. Sigma_54_int.
IPR025662. Sigma_54_int_dom_ATP-bd_1.
IPR025943. Sigma_54_int_dom_ATP-bd_2.
IPR025944. Sigma_54_int_dom_CS.
IPR004096. V4R.
IPR010523. XylR_N.
PfamiView protein in Pfam
PF02954. HTH_8. 1 hit.
PF00158. Sigma54_activat. 1 hit.
PF02830. V4R. 1 hit.
PF06505. XylR_N. 1 hit.
PRINTSiPR01590. HTHFIS.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD485437. XylR_N. 1 hit.
SMARTiView protein in SMART
SM00382. AAA. 1 hit.
SM00989. V4R. 1 hit.
SUPFAMiSSF111126. SSF111126. 1 hit.
SSF46689. SSF46689. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiView protein in PROSITE
PS00675. SIGMA54_INTERACT_1. 1 hit.
PS00676. SIGMA54_INTERACT_2. 1 hit.
PS00688. SIGMA54_INTERACT_3. 1 hit.
PS50045. SIGMA54_INTERACT_4. 1 hit.

Sequencei

Sequence statusi: Complete.

O84957-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSSTDNFSA TMRDGLSNLA RRLRFAMKEG SIWLGEQRMI LLHTAALGAL
60 70 80 90 100
RKELVDTLGM ERARGLFMRM GFHSGVRDAE LAKTMRSGHS DFGMLEMGPC
110 120 130 140 150
LHTIEGVVRV TPLTVDINIA AGVYHGEFLW EDSFEGDVHR QMFGVAQAPV
160 170 180 190 200
CWMQIGYATG YTSALMGKTI LYRELECVGC GHPHCRILGK PLEQWEDGEA
210 220 230 240 250
ELALYQPDPV IDTILALQSE VEQLRALQRA NDQPADLVGG SPGFRAAWNL
260 270 280 290 300
LQRAAGSSVT VLLLGETGVG KERFAQALHG VSARAGKPFV AVNCAAIPDE
310 320 330 340 350
LIESELFGVE KGAFTGAHQS RAGRFERAHG GTLFLDELGE LSASAQSKLL
360 370 380 390 400
RVLQEGEVER VGGNEARKVD VRLVAATNVD LAEAVRQGTF RKDLYYRLNV
410 420 430 440 450
YPVTIPPLRE RLDDIRLLAE RFTARYGARH GKKILGITDR ALAELRRYDW
460 470 480 490 500
PGNVRELENV IERGVILAAN GGQISAEQLF LPGAEAPPAV DTTPRLGEQG
510 520 530 540 550
ALPGLREAAV HGLLDYMAEN GLALGEVESV LMEAAMQRAD GNLSQAARLL
560
GLTRPQLAYR WKTRGTRG
Length:568
Mass (Da):62,076
Last modified:November 1, 1998 - v1
Checksum:i45C2F316C50F6990
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF026065 Genomic DNA. Translation: AAC32451.1.

Similar proteinsi

Entry informationi

Entry nameiO84957_9RALS
AccessioniPrimary (citable) accession number: O84957
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: August 30, 2017
This is version 104 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources