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Protein
Submitted name:

HTH-type transcriptional regulator KdgR

Gene

ptxS

Organism
Pseudomonas aeruginosa
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi14 – 33H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
HTH-type transcriptional regulator KdgRImported
Submitted name:
Kdg operon repressorImported
Submitted name:
PtxSImported
Submitted name:
Transcriptional regulatorImported
Submitted name:
Transcriptional regulator PtxSImported
Gene namesi
Name:ptxSImported
Synonyms:kdgR_2Imported, kdgR_3Imported
ORF Names:AOY09_03344Imported, CAZ03_19815Imported, CAZ10_28275Imported, PAERUG_E15_London_28_01_14_07757Imported, PAMH19_5728Imported, RW109_RW109_03752Imported
OrganismiPseudomonas aeruginosaImported
Taxonomic identifieri287 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000043988 Componenti: Unassembled WGS sequence
  • UP000194726 Componenti: Unassembled WGS sequence
  • UP000233777 Componenti: Chromosome mainomosome
  • UP000194857 Componenti: Unassembled WGS sequence

Organism-specific databases

PseudoCAPiPA2259

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini12 – 67HTH lacI-typeInterPro annotationAdd BLAST56

Phylogenomic databases

eggNOGiENOG4108M60 Bacteria
COG1609 LUCA
HOGENOMiHOG000220179
KOiK02525

Family and domain databases

CDDicd01392 HTH_LacI, 1 hit
InterProiView protein in InterPro
IPR000843 HTH_LacI
IPR010982 Lambda_DNA-bd_dom_sf
IPR001761 Peripla_BP/Lac1_sug-bd_dom
IPR028082 Peripla_BP_I
PfamiView protein in Pfam
PF00356 LacI, 1 hit
PF00532 Peripla_BP_1, 1 hit
SMARTiView protein in SMART
SM00354 HTH_LACI, 1 hit
SUPFAMiSSF47413 SSF47413, 1 hit
SSF53822 SSF53822, 1 hit
PROSITEiView protein in PROSITE
PS50932 HTH_LACI_2, 1 hit

Sequencei

Sequence statusi: Complete.

O84915-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNGSVLPSRG RVTINQVAEA AGVSKASVSR YIGGDRQLLA DATARRIERA
60 70 80 90 100
IDQLDYRPNQ MARGLKRGRT RLIGMLVADI LNPYSVAVMH GVETACREHG
110 120 130 140 150
YSLVVCNTDR DDEQERHHLA ALQSYNVEGL IVNTLGHHPG ELRALHRELP
160 170 180 190 200
MVLVDRQLAE LDTDLVGLDN ADAVEQALDH LQHRGFRDIL LVTEPLDGTS
210 220 230 240 250
SRIERVQAFN ASIGRRPALK GQVLQTDDFF RDGLRAFLSA SGPGPKALFT
260 270 280 290 300
CNGVATLCAT RQLRDLGCRL FDEVGLLALD ELDWYPLVGS GITALAQPTD
310 320 330 340
EIGRTAFERL LARLEGDREP ARRVTFPAQL IVRGSTHPRG
Length:340
Mass (Da):37,391
Last modified:November 1, 1998 - v1
Checksum:iF977BD13FCF35EF4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF012100 Genomic DNA Translation: AAC26482.1
CP012901 Genomic DNA Translation: ALV78395.1
CDAZ01000027 Genomic DNA Translation: CEI20971.1
CVWF01000408 Genomic DNA Translation: CRR07414.1
NFFO01000021 Genomic DNA Translation: OTH82296.1
NFFZ01000019 Genomic DNA Translation: OTI57004.1
LT969520 Genomic DNA Translation: SOV29639.1
PIRiE83364
RefSeqiNP_250949.1, NC_002516.2
WP_003113738.1, NZ_PTLY01000005.1

Genome annotation databases

EnsemblBacteriaiCEI20971; CEI20971; PAMH19_5728
CRP02407; CRP02407; PAERUG_P32_London_17_VIM_2_10_11_03626
CRR07414; CRR07414; PAERUG_E15_London_28_01_14_07757
GeneIDi877811
KEGGipae:PA2259
PATRICifig|287.1479.peg.1898

Similar proteinsi

Entry informationi

Entry nameiO84915_PSEAI
AccessioniPrimary (citable) accession number: O84915
Secondary accession number(s): Q7DCD0
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: May 23, 2018
This is version 134 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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