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Protein
Submitted name:

HTH-type transcriptional regulator KdgR

Gene

ptxS

Organism
Pseudomonas aeruginosa
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi14 – 33H-T-H motifPROSITE-ProRule annotationAdd BLAST20

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
HTH-type transcriptional regulator KdgRImported
Submitted name:
Kdg operon repressorImported
Submitted name:
PtxSImported
Submitted name:
Transcriptional regulatorImported
Submitted name:
Transcriptional regulator PtxSImported
Gene namesi
Name:ptxSImported
Synonyms:kdgR_1Imported, kdgR_3Imported
ORF Names:AOY09_03344Imported, B0B20_26845Imported, PAERUG_E15_London_28_01_14_07757Imported, PAERUG_P32_London_17_VIM_2_10_11_03626Imported, PAMH19_5728Imported
OrganismiPseudomonas aeruginosaImported
Taxonomic identifieri287 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000043988 Componenti: Unassembled WGS sequence
  • UP000189003 Componenti: Unassembled WGS sequence
  • UP000042235 Componenti: Unassembled WGS sequence

Organism-specific databases

PseudoCAPiPA2259.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini12 – 67HTH lacI-type DNA-bindingInterPro annotationAdd BLAST56

Phylogenomic databases

eggNOGiENOG4108M60. Bacteria.
COG1609. LUCA.
HOGENOMiHOG000220179.
KOiK02525.

Family and domain databases

CDDicd01392. HTH_LacI. 1 hit.
InterProiView protein in InterPro
IPR000843. HTH_LacI.
IPR010982. Lambda_DNA-bd_dom.
IPR001761. Peripla_BP/Lac1_sug-bd_dom.
IPR028082. Peripla_BP_I.
PfamiView protein in Pfam
PF00356. LacI. 1 hit.
PF00532. Peripla_BP_1. 1 hit.
SMARTiView protein in SMART
SM00354. HTH_LACI. 1 hit.
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53822. SSF53822. 1 hit.
PROSITEiView protein in PROSITE
PS50932. HTH_LACI_2. 1 hit.

Sequencei

Sequence statusi: Complete.

O84915-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNGSVLPSRG RVTINQVAEA AGVSKASVSR YIGGDRQLLA DATARRIERA
60 70 80 90 100
IDQLDYRPNQ MARGLKRGRT RLIGMLVADI LNPYSVAVMH GVETACREHG
110 120 130 140 150
YSLVVCNTDR DDEQERHHLA ALQSYNVEGL IVNTLGHHPG ELRALHRELP
160 170 180 190 200
MVLVDRQLAE LDTDLVGLDN ADAVEQALDH LQHRGFRDIL LVTEPLDGTS
210 220 230 240 250
SRIERVQAFN ASIGRRPALK GQVLQTDDFF RDGLRAFLSA SGPGPKALFT
260 270 280 290 300
CNGVATLCAT RQLRDLGCRL FDEVGLLALD ELDWYPLVGS GITALAQPTD
310 320 330 340
EIGRTAFERL LARLEGDREP ARRVTFPAQL IVRGSTHPRG
Length:340
Mass (Da):37,391
Last modified:November 1, 1998 - v1
Checksum:iF977BD13FCF35EF4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF012100 Genomic DNA. Translation: AAC26482.1.
CP012901 Genomic DNA. Translation: ALV78395.1.
CDAZ01000027 Genomic DNA. Translation: CEI20971.1.
CVVJ01000133 Genomic DNA. Translation: CRP02407.1.
CVWF01000408 Genomic DNA. Translation: CRR07414.1.
MULE01000022 Genomic DNA. Translation: ONN01146.1.
PIRiE83364.
RefSeqiNP_250949.1. NC_002516.2.
WP_003113738.1. NZ_NBVZ01000006.1.

Genome annotation databases

EnsemblBacteriaiCEI20971; CEI20971; PAMH19_5728.
CRP02407; CRP02407; PAERUG_P32_London_17_VIM_2_10_11_03626.
CRR07414; CRR07414; PAERUG_E15_London_28_01_14_07757.
GeneIDi877811.
KEGGipae:PA2259.
PATRICifig|287.1479.peg.1898.

Similar proteinsi

Entry informationi

Entry nameiO84915_PSEAI
AccessioniPrimary (citable) accession number: O84915
Secondary accession number(s): Q7DCD0
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: August 30, 2017
This is version 127 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported