O84907 (O84907_ZOBGA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Kappa-carrageenase EMBL AAC27890.1
EC=3.2.1.83 EMBL AAC27890.1

Gene names

Name:

cgkA EMBL AAC27890.1

Organism

Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) EMBL AAC27890.1

Taxonomic identifier

63186 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Zobellia

Protein attributes

Sequence length	545 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL AAC27890.1
Molecular function	Glycosidase EMBL AAC27890.1 Hydrolase
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	kappa-carrageenase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 35	35	Potential EMBL AAC27890.1
	Chain	36 – 545	510	kappa-carrageenase EMBL AAC27890.1		PRO_5000053248

Sequences

	Sequence		Length	Mass (Da)
	O84907 [UniParc]. Last modified November 1, 1998. Version 1. Checksum: 17C5839C1160EA0E	FASTA	545	61,458
	10 20 30 40 50 60 MKKPNFYGKM GRTALSSLFY LFFLGLVYGQ QPTKTSNPND QWTIKWSASD EFNKNDPDWA 70 80 90 100 110 120 KWIKTGNLPN TSAWKWNNQK NVKISNGIAE LTMRHNANNT PPDGGTYFTS GIFKSYQKFT 130 140 150 160 170 180 YGYFEAKIQG ADIGEGVCPS FWLYSDFDYS VANGETVYSE IDVVELQQFD WYEGHQDDIY 190 200 210 220 230 240 DMDLNLHAVV KENGQGVWKR PKMYPQEQLN KWRAMDPSKD FHIYGCEVNQ NEIIWYVDGV 250 260 270 280 290 300 EVARKPNKYW HRPMNVTLSL GLRKPFVKFF DNKNNAINPE TDAKAREKLS DIPTSMYVDY 310 320 330 340 350 360 VRVWEKSAGN TTNPPTSEVG TLKTKGSKLV IDHWDASTGT ISAVSNNTKT GQYAGSVNNA 370 380 390 400 410 420 SIAQIVTLKA NTSYKVSAFG KASSPGTSAY LGISKASNNE LISNFEFKTT SYSKGEIEIR 430 440 450 460 470 480 TGNVQESYRI WYWSSGQAYC DDFNLVEINS GASQLNENET ETALEKGIHI YPNPYKNGPL 490 500 510 520 530 540 TIDFGKPFSG EVQITGLNGR TFLRRNVVDQ TSVQLLESKS KFKSGLYIVK ISGPDGEVSK KILVE

References

[1]	"The kappa-carrageenase of the marine bacterium Cytophaga drobachiensis. Structural and phylogenetic relationships within family-16 glycoside hydrolases." Barbeyron T., Gerard A., Potin P., Henrissat B., Kloareg B. Mol. Biol. Evol. 15:528-537(1998) [PubMed: 9580981] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Dsij EMBL AAC27890.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF007559 Genomic DNA. Translation: AAC27890.1.
3D structure databases
HSSP	HSSP built from PDB template 1DYP based on UniProtKB P43478.
ProteinModelPortal	O84907.
ModBase	Search...
Protein family/group databases
CAZy	CBM16. Carbohydrate-Binding Module Family 16. GH16. Glycoside Hydrolase Family 16.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR008985. ConA-like_lec_gl. IPR013320. ConA-like_subgrp. IPR000757. Glyco_hydro_16. [Graphical view]
Gene3D	G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit.
Pfam	PF00722. Glyco_hydro_16. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

O84907_ZOBGA

Accession

Primary (citable) accession number: O84907

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1998
Last sequence update:	November 1, 1998
Last modified:	December 14, 2011
This is version 42 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)