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Protein
Submitted name:

Probable Yop proteins translocation protein C/general secretion pathway protein

Gene

yscC

Organism
Chlamydia trachomatis (strain D/UW-3/Cx)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Protein family/group databases

TCDBi3.A.6.3.1. the type iii (virulence-related) secretory pathway (iiisp) family.

Names & Taxonomyi

Protein namesi
Submitted name:
Probable Yop proteins translocation protein C/general secretion pathway proteinImported
Gene namesi
Name:yscCImported
Ordered Locus Names:CT_674Imported
OrganismiChlamydia trachomatis (strain D/UW-3/Cx)Imported
Taxonomic identifieri272561 [NCBI]
Taxonomic lineageiBacteriaChlamydiaeChlamydialesChlamydiaceaeChlamydia/Chlamydophila groupChlamydia
Proteomesi
  • UP000000431 Componenti: Chromosome

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi272561.CT674.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini365 – 42460Secretin_NInterPro annotationAdd
BLAST
Domaini522 – 59675Secretin_NInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili153 – 18028Sequence analysisAdd
BLAST

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG4107U1U. Bacteria.
COG1450. LUCA.
InParanoidiO84681.
KOiK03219.
OMAiYAVVEMD.
OrthoDBiEOG6423BN.

Family and domain databases

InterProiIPR001775. GspD/PilQ.
IPR005644. NolW-like.
IPR004846. T2SS/T3SS.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 2 hits.
[Graphical view]
PRINTSiPR00811. BCTERIALGSPD.

Sequencei

Sequence statusi: Complete.

O84681-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNIVTSKIGS KILRIIQNNK KLGLLSALVV LDAALLSVNS RSSEGLIGQS
60 70 80 90 100
ASLPNYHETE QQIAACPKNI AKNLAKKSSP GSKPTVGASF PSQPVSVKAA
110 120 130 140 150
PAKPQTPVAQ TRHFKKSHQI FSPNFTQSPQ QVNKPEERRR PLESRYLQGA
160 170 180 190 200
VKQAAAAKEK KALEQEVSKQ EEEASKLWEE KQSYARRAVN AINFSVRKQI
210 220 230 240 250
EEQQKTISNP GNDQTLPRKK DPQTSGEPVI QTVQDCSQDQ EEEKKVLERL
260 270 280 290 300
NKRSLTCQDL KEVEYTVNFE DISILELLQF VSKISGTNFV FDSNDLQFNV
310 320 330 340 350
TIVSHDPTSV DDLATILLQV LKMHDLKVVE QGNNVLIYRN PKLSKLSTVV
360 370 380 390 400
TDGSAKDTCE AVVVTRVFRL YSVSPSAAVG IIQPLLSHDA IISASESTRH
410 420 430 440 450
IIVSDIAGNI EKVRELLQAL DSPGTAIDMS EYDVQFANPA ALVSYCQDVL
460 470 480 490 500
GAMAEEEAFQ IFIQPGTNKI FVISSPRLTA KTIQLLESLD IPEMAHTLDD
510 520 530 540 550
VTSPAAALGS SGAANPKSLR FFMYKLKYQN GAAIAQAIQD IGYNLYVTTA
560 570 580 590 600
MDEDFINTLN SIQWLPVNNS IVVIGNQANV DKVVSLLNGL DLPPKQVYIE
610 620 630 640 650
VLILETSLEK SWDFGVQWAA LGDEQGKVAY ASGLLSNTGL TDPLRNQSLP
660 670 680 690 700
VAPNPGNISL PTPGQLAGIS DMMYGSSAFG LGIIGNVLSH NGKSYLTLGG
710 720 730 740 750
LLSALDQDGD TTVVLNPRIM AQDTQQASFF VGQTIPFQTT STVIQETGSV
760 770 780 790 800
TQNIEYEDIG VNLVVTSTIA PNNVVTLQIE QTISELHSAQ GVLTPVTDKT
810 820 830 840 850
FAATRLQVPD GCFLVMSGHI RDKLTKIVSG VPLLSSLPLI KGLFSRSIDQ
860 870 880 890 900
RQKRNIMIFI KPKVISSFEE GTALSNTEGY RYNWESERGS LEVAPRHAPE
910 920
CQHIPKVQAE SDFKMLEIEA E
Length:921
Mass (Da):100,580
Last modified:November 1, 1998 - v1
Checksum:i0A6F4794DBF0F7D7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001273 Genomic DNA. Translation: AAC68269.1.
PIRiF71486.
RefSeqiNP_220193.1. NC_000117.1.
WP_010725298.1. NC_000117.1.

Genome annotation databases

EnsemblBacteriaiAAC68269; AAC68269; CT_674.
GeneIDi884465.
KEGGictr:CT_674.
PATRICi20380998. VBIChlTra43535_0741.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001273 Genomic DNA. Translation: AAC68269.1.
PIRiF71486.
RefSeqiNP_220193.1. NC_000117.1.
WP_010725298.1. NC_000117.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272561.CT674.

Protein family/group databases

TCDBi3.A.6.3.1. the type iii (virulence-related) secretory pathway (iiisp) family.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC68269; AAC68269; CT_674.
GeneIDi884465.
KEGGictr:CT_674.
PATRICi20380998. VBIChlTra43535_0741.

Phylogenomic databases

eggNOGiENOG4107U1U. Bacteria.
COG1450. LUCA.
InParanoidiO84681.
KOiK03219.
OMAiYAVVEMD.
OrthoDBiEOG6423BN.

Family and domain databases

InterProiIPR001775. GspD/PilQ.
IPR005644. NolW-like.
IPR004846. T2SS/T3SS.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 2 hits.
[Graphical view]
PRINTSiPR00811. BCTERIALGSPD.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of an obligate intracellular pathogen of humans: Chlamydia trachomatis."
    Stephens R.S., Kalman S., Lammel C.J., Fan J., Marathe R., Aravind L., Mitchell W.P., Olinger L., Tatusov R.L., Zhao Q., Koonin E.V., Davis R.W.
    Science 282:754-759(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: D/UW-3/CxImported.

Entry informationi

Entry nameiO84681_CHLTR
AccessioniPrimary (citable) accession number: O84681
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: March 16, 2016
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.