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Protein
Submitted name:

Low Calcium Response D

Gene

lcrD

Organism
Chlamydia trachomatis (strain D/UW-3/Cx)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Complete GO annotation...

Protein family/group databases

TCDBi3.A.6.3.1. the type iii (virulence-related) secretory pathway (iiisp) family.

Names & Taxonomyi

Protein namesi
Submitted name:
Low Calcium Response DImported
Gene namesi
Name:lcrDImported
Ordered Locus Names:CT_090Imported
OrganismiChlamydia trachomatis (strain D/UW-3/Cx)Imported
Taxonomic identifieri272561 [NCBI]
Taxonomic lineageiBacteriaChlamydiaeChlamydialesChlamydiaceaeChlamydia/Chlamydophila groupChlamydia
Proteomesi
  • UP000000431 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei27 – 4418HelicalSequence analysisAdd
BLAST
Transmembranei51 – 7020HelicalSequence analysisAdd
BLAST
Transmembranei114 – 14027HelicalSequence analysisAdd
BLAST
Transmembranei209 – 22921HelicalSequence analysisAdd
BLAST
Transmembranei241 – 26727HelicalSequence analysisAdd
BLAST
Transmembranei310 – 33021HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi272561.CT090.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4108HR8. Bacteria.
COG4789. LUCA.
InParanoidiO84092.
KOiK03230.
OMAiDLMITIN.
OrthoDBiEOG6RZB0J.

Family and domain databases

InterProiIPR001712. T3SS_FHIPEP.
IPR006302. T3SS_HrcV.
[Graphical view]
PfamiPF00771. FHIPEP. 1 hit.
[Graphical view]
PIRSFiPIRSF005419. FlhA. 1 hit.
PRINTSiPR00949. TYPE3IMAPROT.
TIGRFAMsiTIGR01399. hrcV. 1 hit.

Sequencei

Sequence statusi: Complete.

O84092-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKLLNFVSR TFGGDAALNM INKSSDLILA MWMLGVVLMI ILPLPPAMVD
60 70 80 90 100
FMITINLAIS VFLLMVALYI PSALQLSVFP SLLLITTMFR LGINISSSRQ
110 120 130 140 150
ILLHAYAGHV IQAFGDFVVG GNYVVGFIIF LIITIIQFIV VTKGAERVAE
160 170 180 190 200
VAARFRLDAM PGKQMAIDAD LRAGMIDATQ ARDKRSQIQK ESELYGAMDG
210 220 230 240 250
AMKFIKGDVI AGIVISLINI VGGLVIGVTM KGMTMAQAAH IYTLITIGDG
260 270 280 290 300
LVSQIPSLLI SLTAGIVTTR VSSDKDTNLG KEISSQLVKE PRALLLSAGA
310 320 330 340 350
TLGIGFFKGF PLWSFALMAV LFAVLGILLI TKKNSPGKKG GASSTTTVGA
360 370 380 390 400
ADGAAASGEN SDDYALTLPV ILELGKDLSK LIQQRTKSGQ SFVDDMIPKM
410 420 430 440 450
RQALYQDIGI RYPGIHVRTD SPSLEGNDYM ILLNEVPYVR GKIPPNHVLT
460 470 480 490 500
NEVEENLSRY NLPFITYKNA AGLPSTWVST DALTILEKAA IKYWSPLEVI
510 520 530 540 550
ILHLSYFFHR NSQEFLGIQE VRSMIEFMER SFPDLVKEVT RLIPLQKLTE
560 570 580 590 600
IFKRLVQEQI SIKDLRTILE SLSEWAQTEK DTVLLTEYVR SSLKLYISFK
610 620 630 640 650
FSQGQSAISV YLLDPEIEEM IRGAIKQTSA GSYLALDPDS VNLILKSMRM
660 670 680 690 700
TITPTPPGGQ PPVLLTAIDV RRYVRKLIET EFPDIAVISY QEVLPEIRIQ

PLGRIQIF
Length:708
Mass (Da):77,974
Last modified:November 1, 1998 - v1
Checksum:i7E24A94BE05B5E5C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001273 Genomic DNA. Translation: AAC67681.1.
PIRiB71558.
RefSeqiNP_219593.1. NC_000117.1.
WP_009871438.1. NC_000117.1.

Genome annotation databases

EnsemblBacteriaiAAC67681; AAC67681; CT_090.
GeneIDi884159.
KEGGictr:CT_090.
PATRICi20379663. VBIChlTra43535_0098.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE001273 Genomic DNA. Translation: AAC67681.1.
PIRiB71558.
RefSeqiNP_219593.1. NC_000117.1.
WP_009871438.1. NC_000117.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272561.CT090.

Protein family/group databases

TCDBi3.A.6.3.1. the type iii (virulence-related) secretory pathway (iiisp) family.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC67681; AAC67681; CT_090.
GeneIDi884159.
KEGGictr:CT_090.
PATRICi20379663. VBIChlTra43535_0098.

Phylogenomic databases

eggNOGiENOG4108HR8. Bacteria.
COG4789. LUCA.
InParanoidiO84092.
KOiK03230.
OMAiDLMITIN.
OrthoDBiEOG6RZB0J.

Family and domain databases

InterProiIPR001712. T3SS_FHIPEP.
IPR006302. T3SS_HrcV.
[Graphical view]
PfamiPF00771. FHIPEP. 1 hit.
[Graphical view]
PIRSFiPIRSF005419. FlhA. 1 hit.
PRINTSiPR00949. TYPE3IMAPROT.
TIGRFAMsiTIGR01399. hrcV. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of an obligate intracellular pathogen of humans: Chlamydia trachomatis."
    Stephens R.S., Kalman S., Lammel C.J., Fan J., Marathe R., Aravind L., Mitchell W.P., Olinger L., Tatusov R.L., Zhao Q., Koonin E.V., Davis R.W.
    Science 282:754-759(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: D/UW-3/CxImported.

Entry informationi

Entry nameiO84092_CHLTR
AccessioniPrimary (citable) accession number: O84092
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: March 16, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.