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Protein

50S ribosomal protein L32

Gene

rpmF

Organism
Treponema pallidum (strain Nichols)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciTPAL243276:GC1H-855-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L32
Gene namesi
Name:rpmF
Ordered Locus Names:TP_0807
OrganismiTreponema pallidum (strain Nichols)
Taxonomic identifieri243276 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesSpirochaetaceaeTreponema
ProteomesiUP000000811 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11RemovedBy similarity
Chaini2 – 626150S ribosomal protein L32PRO_0000172429Add
BLAST

Interactioni

Protein-protein interaction databases

IntActiO83785. 23 interactions.
STRINGi243276.TP0807.

Structurei

3D structure databases

ProteinModelPortaliO83785.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L32P family.Curated

Phylogenomic databases

eggNOGiCOG0333.
KOiK02911.
OMAiRRANWKM.
OrthoDBiEOG6VMTT4.

Family and domain databases

HAMAPiMF_00340. Ribosomal_L32.
InterProiIPR002677. Ribosomal_L32p.
IPR011332. Ribosomal_zn-bd.
[Graphical view]
PfamiPF01783. Ribosomal_L32p. 1 hit.
[Graphical view]
SUPFAMiSSF57829. SSF57829. 1 hit.
TIGRFAMsiTIGR01031. rpmF_bact. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O83785-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVPRANTSK ARTRRRRAVN MRLEAPHLVE CGNCGNFVQS HRVCGRCGFY
60
RGRQVINPDD LC
Length:62
Mass (Da):7,045
Last modified:January 23, 2007 - v3
Checksum:i57299DB41E909294
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000520 Genomic DNA. Translation: AAC65776.1.
PIRiE71277.
RefSeqiNP_219244.1. NC_000919.1.
WP_010882252.1. NC_021490.2.
YP_008091634.1. NC_021490.2.

Genome annotation databases

EnsemblBacteriaiAAC65776; AAC65776; TP_0807.
GeneIDi2610866.
KEGGitpa:TP0807.
tpw:TPANIC_0807.
PATRICi20531713. VBITrePal57110_0854.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000520 Genomic DNA. Translation: AAC65776.1.
PIRiE71277.
RefSeqiNP_219244.1. NC_000919.1.
WP_010882252.1. NC_021490.2.
YP_008091634.1. NC_021490.2.

3D structure databases

ProteinModelPortaliO83785.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiO83785. 23 interactions.
STRINGi243276.TP0807.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC65776; AAC65776; TP_0807.
GeneIDi2610866.
KEGGitpa:TP0807.
tpw:TPANIC_0807.
PATRICi20531713. VBITrePal57110_0854.

Phylogenomic databases

eggNOGiCOG0333.
KOiK02911.
OMAiRRANWKM.
OrthoDBiEOG6VMTT4.

Enzyme and pathway databases

BioCyciTPAL243276:GC1H-855-MONOMER.

Family and domain databases

HAMAPiMF_00340. Ribosomal_L32.
InterProiIPR002677. Ribosomal_L32p.
IPR011332. Ribosomal_zn-bd.
[Graphical view]
PfamiPF01783. Ribosomal_L32p. 1 hit.
[Graphical view]
SUPFAMiSSF57829. SSF57829. 1 hit.
TIGRFAMsiTIGR01031. rpmF_bact. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Nichols.

Entry informationi

Entry nameiRL32_TREPA
AccessioniPrimary (citable) accession number: O83785
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: January 23, 2007
Last modified: May 27, 2015
This is version 80 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.