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O83779 (O83779_TREPA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 87. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

S14 family endopeptidase ClpA EMBL AGN75973.1
EC=3.4.21.92 EMBL AGN75973.1
Gene names
Name:clpA2 EMBL AGN75973.1
Ordered Locus Names:TP_0801 EMBL AAC65770.1
ORF Names:TPANIC_0801 EMBL AGN75973.1
OrganismTreponema pallidum (strain Nichols) [Complete proteome] [HAMAP] EMBL AAC65770.1
Taxonomic identifier243276 [NCBI]
Taxonomic lineageBacteriaSpirochaetesSpirochaetalesSpirochaetaceaeTreponema

Protein attributes

Sequence length809 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the clpA/clpB family. RuleBase RU004432

Sequences

Sequence LengthMass (Da)Tools
O83779 [UniParc].

Last modified November 1, 1998. Version 1.
Checksum: D9C8CBEE250CAEEE

FASTA80989,328
        10         20         30         40         50         60 
MKIIISASVQ IILDQAFDLA RKRRHEYITA EHVLFSALAH PAALEIINLC SADIALIHSN 

        70         80         90        100        110        120 
LSEFLKTQVP VDLSHTPSQS LGFQHLLKRA VLYCEANKKS ALEVGDLLVS LLQAETNYAS 

       130        140        150        160        170        180 
YYMRMSGMST ARLIEVIARV NGIRHGDKNV SMGSNAQERY SESDDVGESA GHGPPLDGTE 

       190        200        210        220        230        240 
GDGNTADVHV HYEHCAHKRT DADTHRYTVL EKYTVNLTER ARRGELAPLI GRTQEIERTI 

       250        260        270        280        290        300 
QILCRRQKNN PVHVGEAGVG KTAITEGLAQ RIVRCDVPEA LEGVEIFSLD MTSLLAGTKF 

       310        320        330        340        350        360 
RGDFEERLKR LAEELEKKTQ AILFIDEIHT VVGTGSGGSG GLDASNLLKP LLSSGKIRCI 

       370        380        390        400        410        420 
GSTTYEEYTK HFRKDQALAR RFQKIDIEEP SEEETLRILE GIRTLYEDFH AVHYSDEALA 

       430        440        450        460        470        480 
AAVRLSVQYI QGRHLPDKAI DIIDEAGACA KLSRGKHGTE GVCSVIGESD IDEIVAKIAK 

       490        500        510        520        530        540 
IPKQRVSASE IEKLRNFERS ISEKIFGQGE AIDLVTRTLK RARVGLRVKH KPIANLLFVG 

       550        560        570        580        590        600 
ATGVGKTELA RTLAQELGIV LHRFDMSEYQ EKHTVSRLIG SPPGYVGFEE GGLLTDAVRK 

       610        620        630        640        650        660 
QPHAVLLLDE IEKAHPDIFN VLLQVMDYAT LTDNQGRKAD FRNVILIMTS NAGARNMGVS 

       670        680        690        700        710        720 
LIGFHKGQVG TAVIDEAVER IFSPEFRNRL DAVIRFDALS LETMERIARK ELALVCEQLQ 

       730        740        750        760        770        780 
KKHIRFDITD DALALLAERS HSGGSGARNV ARLVEQEVAN VLADLMLFGG VAEGDALRCT 

       790        800 
VKDRHAQCNF LRIECVQSSY SGSIQDALG 

« Hide

References

[1]"Complete genome sequence of Treponema pallidum, the syphilis spirochete."
Fraser C.M., Norris S.J., Weinstock G.M., White O., Sutton G.G., Dodson R., Gwinn M., Hickey E.K., Clayton R., Ketchum K.A., Sodergren E., Hardham J.M., McLeod M.P., Salzberg S., Peterson J., Khalak H., Richardson D., Howell J.K. expand/collapse author list , Chidambaram M., Utterback T., McDonald L., Artiach P., Bowman C., Cotton M.D., Fujii C., Garland S., Hatch B., Horst K., Roberts K., Watthey L., Weidman J., Smith H.O., Venter J.C.
Science 281:375-388(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Nichols EMBL AAC65770.1.
[2]"Resequencing of Treponema pallidum ssp. pallidum Strains Nichols and SS14: Correction of Sequencing Errors Resulted in Increased Separation of Syphilis Treponeme Subclusters."
Petrosova H., Pospisilova P., Strouhal M., Cejkova D., Zobanikova M., Mikalova L., Sodergren E., Weinstock G.M., Smajs D.
PLoS ONE 8:E74319-E74319(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Nichols EMBL AGN75973.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE000520 Genomic DNA. Translation: AAC65770.1.
CP004010 Genomic DNA. Translation: AGN75973.1.
PIRC71279.
RefSeqNP_219238.1. NC_000919.1.
YP_008091628.1. NC_021490.2.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING243276.TP0801.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC65770; AAC65770; TP_0801.
GeneID15852092.
2610835.
KEGGtpa:TP0801.
tpw:TPANIC_0801.
PATRIC20531697. VBITrePal57110_0846.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK03694.
OMAKEACYLI.
OrthoDBEOG65F8SM.
ProtClustDBCLSK218743.

Enzyme and pathway databases

BioCycTPAL243276:GC1H-849-MONOMER.

Family and domain databases

Gene3D1.10.1780.10. 1 hit.
3.40.50.300. 2 hits.
InterProIPR003593. AAA+_ATPase.
IPR013093. ATPase_AAA-2.
IPR003959. ATPase_AAA_core.
IPR019489. Clp_ATPase_C.
IPR004176. Clp_N.
IPR013461. ClpA.
IPR001270. ClpA/B.
IPR018368. ClpA/B_CS1.
IPR028299. ClpA/B_CS2.
IPR023150. Dbl_Clp-N.
IPR027417. P-loop_NTPase.
[Graphical view]
PANTHERPTHR11638:SF14. PTHR11638:SF14. 1 hit.
PfamPF00004. AAA. 1 hit.
PF07724. AAA_2. 1 hit.
PF02861. Clp_N. 1 hit.
PF10431. ClpB_D2-small. 1 hit.
[Graphical view]
PRINTSPR00300. CLPPROTEASEA.
SMARTSM00382. AAA. 2 hits.
SM01086. ClpB_D2-small. 1 hit.
[Graphical view]
SUPFAMSSF52540. SSF52540. 2 hits.
TIGRFAMsTIGR02639. ClpA. 1 hit.
PROSITEPS00870. CLPAB_1. 1 hit.
PS00871. CLPAB_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameO83779_TREPA
AccessionPrimary (citable) accession number: O83779
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: April 16, 2014
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)