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Protein
Submitted name:

Putative sigma factor regulatory protein

Gene

rsbU2

Organism
Treponema pallidum (strain Nichols)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciTPAL243276:GC1H-231-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative sigma factor regulatory proteinImported
Submitted name:
Sigma factor SigG regulation protein, putativeImported
Gene namesi
Name:rsbU2Imported
Ordered Locus Names:TP_0219Imported
ORF Names:TPANIC_0219Imported
OrganismiTreponema pallidum (strain Nichols)Imported
Taxonomic identifieri243276 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesSpirochaetaceaeTreponema
ProteomesiUP000000811 Componenti: Chromosome UP000014259 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi243276.TP0219.

Structurei

3D structure databases

ProteinModelPortaliO83248.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

OMAiENIQVIM.
OrthoDBiEOG6B8XD9.

Family and domain databases

InterProiIPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.

Sequencei

Sequence statusi: Complete.

O83248-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGLLFFSYLF VAVFVFDVFC LKFYTRRAYA LLANIALVSG VASFFLSLSL
60 70 80 90 100
TAVLYGKMNI QAFLFKIALI FFTHASYLFS DMAYQLPYFK KNKRFFLCNT
110 120 130 140 150
TIHLFGILII IFGMGPFKWN VLVSFKFYQN YLFSSVSGIV LYAALFFLII
160 170 180 190 200
PCVTFATLVK KAFMMKSIAY RQQLLFLAGA VALGFITWVI ILFLFAVFPW
210 220 230 240 250
VFVFFPLGGV FIVLFSQWAF ASTGIVSFKE VVFALSRFVL CTVGFSCTAG
260 270 280 290 300
YISVFWVHRF STLDMQFVFG FFIVYALFAL RDYAFDACSV FFGEIADSGQ
310 320 330 340 350
KLAAELQALD YTAKPAQVLR TFMDTLRMRI ACRGLTFLLA DEAGVFKTVY
360 370 380 390 400
SDFEEMATHE MEHQSLQYFF NQDVLMIRKS DPVIDHARQA IRTDILHFFD
410 420 430 440 450
ITHAQMIVLI REAQKLIGCL CFGMKNNGVE YSNHDQHVLE KLYSHFVLVS
460 470 480 490 500
YYLQNIAKQD VVITVDKELK MSHQIIESIQ RKRDFIQDAS VEVDSIAYSA
510 520 530 540 550
HQLGGDFVDF IKLSEKRYLL VIGDVSGKGL AASMSMVILK SVLSTFLRGL
560 570 580 590 600
CLEETAVFTT FIEKINRFIK DNLPCGTFFA GVFCILDLAT HTLYYANCGI
610 620 630 640 650
PLMSMYVASY KNVVEIQGEG RVLGFVKDVM PFLRVRKVQL GQGDVVVFST
660 670 680 690 700
DGMVEVQNLQ RERFGNERVD RILQESHGLP VSQITRTIYA RLCEFMARDM
710
QDDVTVLAIK CLGPR
Length:715
Mass (Da):81,440
Last modified:November 1, 1998 - v1
Checksum:iAB69F260F326E02D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000520 Genomic DNA. Translation: AAC65206.1.
CP004010 Genomic DNA. Translation: AGN75433.1.
PIRiH71352.
RefSeqiNP_218659.1. NC_000919.1.
WP_010881667.1. NC_021490.2.
YP_008091088.1. NC_021490.2.

Genome annotation databases

EnsemblBacteriaiAAC65206; AAC65206; TP_0219.
AGN75433; AGN75433; TPANIC_0219.
GeneIDi2611800.
KEGGitpa:TP0219.
tpw:TPANIC_0219.
PATRICi20530415. VBITrePal57110_0238.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000520 Genomic DNA. Translation: AAC65206.1.
CP004010 Genomic DNA. Translation: AGN75433.1.
PIRiH71352.
RefSeqiNP_218659.1. NC_000919.1.
WP_010881667.1. NC_021490.2.
YP_008091088.1. NC_021490.2.

3D structure databases

ProteinModelPortaliO83248.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi243276.TP0219.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC65206; AAC65206; TP_0219.
AGN75433; AGN75433; TPANIC_0219.
GeneIDi2611800.
KEGGitpa:TP0219.
tpw:TPANIC_0219.
PATRICi20530415. VBITrePal57110_0238.

Phylogenomic databases

OMAiENIQVIM.
OrthoDBiEOG6B8XD9.

Enzyme and pathway databases

BioCyciTPAL243276:GC1H-231-MONOMER.

Family and domain databases

InterProiIPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NicholsImported.
  2. "Resequencing of Treponema pallidum ssp. pallidum strains Nichols and SS14: correction of sequencing errors resulted in increased separation of syphilis treponeme subclusters."
    Petrosova H., Pospisilova P., Strouhal M., Cejkova D., Zobanikova M., Mikalova L., Sodergren E., Weinstock G.M., Smajs D.
    PLoS ONE 8:E74319-E74319(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NicholsImported.

Entry informationi

Entry nameiO83248_TREPA
AccessioniPrimary (citable) accession number: O83248
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: May 27, 2015
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.