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O83247 (O83247_TREPA) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 77. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Sigma factor SigB regulation protein, putative EMBL AAC65205.1
Gene names
Name:rsbU1 EMBL AGN75432.1
Ordered Locus Names:TP_0218 EMBL AAC65205.1
ORF Names:TPANIC_0218 EMBL AGN75432.1
OrganismTreponema pallidum (strain Nichols) [Complete proteome] [HAMAP] EMBL AAC65205.1
Taxonomic identifier243276 [NCBI]
Taxonomic lineageBacteriaSpirochaetesSpirochaetalesSpirochaetaceaeTreponema

Protein attributes

Sequence length489 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processmetabolic process

Inferred from electronic annotation. Source: GOC

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
O83247 [UniParc].

Last modified November 1, 1998. Version 1.
Checksum: 7739E27194241A1D

FASTA48956,170
        10         20         30         40         50         60 
MIRRRLAIVK AGSFALLALF FSIFLRFLSP RYSFLGRFVS ARDMALLISR YEHLPELSSR 

        70         80         90        100        110        120 
DRALLVGFVF MIFALALTEI QRYAHGRIRL VVYRQTETRL FEHFITLLRF CYRNEQLVAA 

       130        140        150        160        170        180 
FQEVLEYRAD CAVLLMDTIS NRVIYNSAAR FVSDTRTYDL VLHKFSMDYT WHWSDGIYFF 

       190        200        210        220        230        240 
DDDLCLMSDR RRARGVCLSS GELRLFIVCR FIRAVEREVI SLLFKEFEEY LNRKRNMSTL 

       250        260        270        280        290        300 
LLYSHVSQEW AMMARVQRAL LPKALPHTKE ICVGAFYQPL VNVSGDYYDV ISIDEHLFLF 

       310        320        330        340        350        360 
VIGDVSGKGL AASLVMGVVL STIRIVEDKK NLPEILYAVD RAVKRMHLHD KYTTLFLGLI 

       370        380        390        400        410        420 
DTAGMNIRYI NASMESPLVF TQAGEAHEVY HLHSNCPVIG IVDLPPIQIH ERTLCPGDVM 

       430        440        450        460        470        480 
VMVSDGVVEV VNAQGVELRD ADEYLHILER HVGEHPAQMA QSIAALALNF SADRTTHDDM 


TIVTVQVKR 

« Hide

References

[1]"Complete genome sequence of Treponema pallidum, the syphilis spirochete."
Fraser C.M., Norris S.J., Weinstock G.M., White O., Sutton G.G., Dodson R.J., Gwinn M.L., Hickey E.K., Clayton R.A., Ketchum K.A., Sodergren E., Hardham J.M., McLeod M.P., Salzberg S.L., Peterson J.D., Khalak H.G., Richardson D.L., Howell J.K. expand/collapse author list , Chidambaram M., Utterback T.R., McDonald L.A., Artiach P., Bowman C., Cotton M.D., Fujii C., Garland S.A., Hatch B., Horst K., Roberts K.M., Sandusky M., Weidman J.F., Smith H.O., Venter J.C.
Science 281:375-388(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Nichols.
[2]"Resequencing of Treponema pallidum ssp. pallidum Strains Nichols and SS14: Correction of Sequencing Errors Resulted in Increased Separation of Syphilis Treponeme Subclusters."
Petrosova H., Pospisilova P., Strouhal M., Cejkova D., Zobanikova M., Mikalova L., Sodergren E., Weinstock G.M., Smajs D.
PLoS ONE 8:E74319-E74319(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Nichols EMBL AGN75432.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE000520 Genomic DNA. Translation: AAC65205.1.
CP004010 Genomic DNA. Translation: AGN75432.1.
PIRG71352.
RefSeqNP_218658.1. NC_000919.1.
YP_008091087.1. NC_021490.2.

3D structure databases

ProteinModelPortalO83247.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActO83247. 4 interactions.
STRING243276.TP0218.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC65205; AAC65205; TP_0218.
GeneID15851513.
2611799.
KEGGtpa:TP0218.
tpw:TPANIC_0218.
PATRIC20530413. VBITrePal57110_0237.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAHEITVEY.
OrthoDBEOG6B8XDR.
ProtClustDBCLSK218591.

Enzyme and pathway databases

BioCycTPAL243276:GC1H-230-MONOMER.

Family and domain databases

Gene3D3.60.40.10. 1 hit.
InterProIPR001932. PP2C-like_dom.
[Graphical view]
PfamPF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTSM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMSSF81606. SSF81606. 1 hit.
ProtoNetSearch...

Entry information

Entry nameO83247_TREPA
AccessionPrimary (citable) accession number: O83247
Entry history
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: February 19, 2014
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)