Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Putative sigma factor regulatory protein

Gene

rsbU1

Organism
Treponema pallidum (strain Nichols)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciTPAL243276:GC1H-230-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative sigma factor regulatory proteinImported
Submitted name:
Sigma factor SigB regulation protein, putativeImported
Gene namesi
Name:rsbU1Imported
Ordered Locus Names:TP_0218Imported
ORF Names:TPANIC_0218Imported
OrganismiTreponema pallidum (strain Nichols)Imported
Taxonomic identifieri243276 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesSpirochaetaceaeTreponema
ProteomesiUP000000811 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

IntActiO83247. 4 interactions.
STRINGi243276.TP0218.

Structurei

3D structure databases

ProteinModelPortaliO83247.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

OrthoDBiEOG6B8XDR.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.

Sequencei

Sequence statusi: Complete.

O83247-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIRRRLAIVK AGSFALLALF FSIFLRFLSP RYSFLGRFVS ARDMALLISR
60 70 80 90 100
YEHLPELSSR DRALLVGFVF MIFALALTEI QRYAHGRIRL VVYRQTETRL
110 120 130 140 150
FEHFITLLRF CYRNEQLVAA FQEVLEYRAD CAVLLMDTIS NRVIYNSAAR
160 170 180 190 200
FVSDTRTYDL VLHKFSMDYT WHWSDGIYFF DDDLCLMSDR RRARGVCLSS
210 220 230 240 250
GELRLFIVCR FIRAVEREVI SLLFKEFEEY LNRKRNMSTL LLYSHVSQEW
260 270 280 290 300
AMMARVQRAL LPKALPHTKE ICVGAFYQPL VNVSGDYYDV ISIDEHLFLF
310 320 330 340 350
VIGDVSGKGL AASLVMGVVL STIRIVEDKK NLPEILYAVD RAVKRMHLHD
360 370 380 390 400
KYTTLFLGLI DTAGMNIRYI NASMESPLVF TQAGEAHEVY HLHSNCPVIG
410 420 430 440 450
IVDLPPIQIH ERTLCPGDVM VMVSDGVVEV VNAQGVELRD ADEYLHILER
460 470 480
HVGEHPAQMA QSIAALALNF SADRTTHDDM TIVTVQVKR
Length:489
Mass (Da):56,170
Last modified:November 1, 1998 - v1
Checksum:i7739E27194241A1D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000520 Genomic DNA. Translation: AAC65205.1.
CP004010 Genomic DNA. Translation: AGN75432.1.
PIRiG71352.
RefSeqiNP_218658.1. NC_000919.1.
YP_008091087.1. NC_021490.2.

Genome annotation databases

EnsemblBacteriaiAAC65205; AAC65205; TP_0218.
AGN75432; AGN75432; TPANIC_0218.
KEGGitpa:TP0218.
tpw:TPANIC_0218.
PATRICi20530413. VBITrePal57110_0237.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000520 Genomic DNA. Translation: AAC65205.1.
CP004010 Genomic DNA. Translation: AGN75432.1.
PIRiG71352.
RefSeqiNP_218658.1. NC_000919.1.
YP_008091087.1. NC_021490.2.

3D structure databases

ProteinModelPortaliO83247.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiO83247. 4 interactions.
STRINGi243276.TP0218.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC65205; AAC65205; TP_0218.
AGN75432; AGN75432; TPANIC_0218.
KEGGitpa:TP0218.
tpw:TPANIC_0218.
PATRICi20530413. VBITrePal57110_0237.

Phylogenomic databases

OrthoDBiEOG6B8XDR.

Enzyme and pathway databases

BioCyciTPAL243276:GC1H-230-MONOMER.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NicholsImported.
  2. "Resequencing of Treponema pallidum ssp. pallidum strains Nichols and SS14: Correction of sequencing errors resulted in increased separation of syphilis treponeme subclusters."
    Petrosova H., Pospisilova P., Strouhal M., Cejkova D., Zobanikova M., Mikalova L., Sodergren E., Weinstock G.M., Smajs D.
    PLoS ONE 8:E74319-E74319(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NicholsImported.

Entry informationi

Entry nameiO83247_TREPA
AccessioniPrimary (citable) accession number: O83247
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: April 1, 2015
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.