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Protein

30S ribosomal protein S2

Gene

rpsB

Organism
Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S2
Gene namesi
Name:rpsB
Ordered Locus Names:PA3656
OrganismiPseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
Taxonomic identifieri208964 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002438 Componenti: Chromosome

Organism-specific databases

PseudoCAPiPA3656.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Pathology & Biotechi

Chemistry

ChEMBLiCHEMBL2364022.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 24624630S ribosomal protein S2PRO_0000134220Add
BLAST

Proteomic databases

PaxDbiO82850.
PRIDEiO82850.

Interactioni

Protein-protein interaction databases

STRINGi208964.PA3656.

Structurei

3D structure databases

ProteinModelPortaliO82850.
SMRiO82850. Positions 9-225.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S2P family.Curated

Phylogenomic databases

eggNOGiENOG4105CE9. Bacteria.
COG0052. LUCA.
HOGENOMiHOG000071892.
InParanoidiO82850.
KOiK02967.
OMAiEALMFER.
OrthoDBiEOG6XWV6P.
PhylomeDBiO82850.

Family and domain databases

HAMAPiMF_00291_B. Ribosomal_S2_B.
InterProiIPR001865. Ribosomal_S2.
IPR005706. Ribosomal_S2_bac/mit/plastid.
IPR018130. Ribosomal_S2_CS.
IPR023591. Ribosomal_S2_flav_dom.
[Graphical view]
PANTHERiPTHR12534. PTHR12534. 1 hit.
PfamiPF00318. Ribosomal_S2. 1 hit.
[Graphical view]
PRINTSiPR00395. RIBOSOMALS2.
SUPFAMiSSF52313. SSF52313. 1 hit.
TIGRFAMsiTIGR01011. rpsB_bact. 1 hit.
PROSITEiPS00962. RIBOSOMAL_S2_1. 1 hit.
PS00963. RIBOSOMAL_S2_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O82850-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQVNMRDML KAGVHFGHQT RYWNPKMGKF IFGARNKIHI INLEKTLPMF
60 70 80 90 100
NEALTFVERL AAGKNKILFV GTKRSAGKIV REEAARCGMP YVDHRWLGGM
110 120 130 140 150
LTNYKTIRQS IKRLRDLETQ SQDGTFDKLT KKEALMRSRD LEKLERSLGG
160 170 180 190 200
IKDMGGLPDA LFVIDVDHER IAITEANKLG IPVIGVVDTN SSPEGVDYVI
210 220 230 240
PGNDDAIRAV QLYLNSMAEA VIRGKQGAAT SADEFVEEAP AESAEG
Length:246
Mass (Da):27,336
Last modified:December 8, 2000 - v2
Checksum:i058821AB94DD3405
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti227 – 24620GAATS…ESAEG → ALPPAPTSSSRKRRPNPPKA DSGTFRRPTVRRKGLGPLFA TFEFLSGRPGTKVF (PubMed:9973356).CuratedAdd
BLAST

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB010087 Genomic DNA. Translation: BAA32342.1.
AE004091 Genomic DNA. Translation: AAG07044.1.
PIRiC83189.
RefSeqiNP_252346.1. NC_002516.2.
WP_003092394.1. NZ_ASJY01000591.1.

Genome annotation databases

EnsemblBacteriaiAAG07044; AAG07044; PA3656.
GeneIDi880593.
KEGGipae:PA3656.
PATRICi19841935. VBIPseAer58763_3825.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB010087 Genomic DNA. Translation: BAA32342.1.
AE004091 Genomic DNA. Translation: AAG07044.1.
PIRiC83189.
RefSeqiNP_252346.1. NC_002516.2.
WP_003092394.1. NZ_ASJY01000591.1.

3D structure databases

ProteinModelPortaliO82850.
SMRiO82850. Positions 9-225.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi208964.PA3656.

Chemistry

ChEMBLiCHEMBL2364022.

Proteomic databases

PaxDbiO82850.
PRIDEiO82850.

Protocols and materials databases

DNASUi880593.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAG07044; AAG07044; PA3656.
GeneIDi880593.
KEGGipae:PA3656.
PATRICi19841935. VBIPseAer58763_3825.

Organism-specific databases

PseudoCAPiPA3656.

Phylogenomic databases

eggNOGiENOG4105CE9. Bacteria.
COG0052. LUCA.
HOGENOMiHOG000071892.
InParanoidiO82850.
KOiK02967.
OMAiEALMFER.
OrthoDBiEOG6XWV6P.
PhylomeDBiO82850.

Family and domain databases

HAMAPiMF_00291_B. Ribosomal_S2_B.
InterProiIPR001865. Ribosomal_S2.
IPR005706. Ribosomal_S2_bac/mit/plastid.
IPR018130. Ribosomal_S2_CS.
IPR023591. Ribosomal_S2_flav_dom.
[Graphical view]
PANTHERiPTHR12534. PTHR12534. 1 hit.
PfamiPF00318. Ribosomal_S2. 1 hit.
[Graphical view]
PRINTSiPR00395. RIBOSOMALS2.
SUPFAMiSSF52313. SSF52313. 1 hit.
TIGRFAMsiTIGR01011. rpsB_bact. 1 hit.
PROSITEiPS00962. RIBOSOMAL_S2_1. 1 hit.
PS00963. RIBOSOMAL_S2_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Molecular cloning, sequencing, purification, and characterization of Pseudomonas aeruginosa ribosome recycling factor."
    Ohnishi M., Janosi L., Shuda M., Matsumoto H., Hayashi T., Terawaki Y., Kaji A.
    J. Bacteriol. 181:1281-1291(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228.

Entry informationi

Entry nameiRS2_PSEAE
AccessioniPrimary (citable) accession number: O82850
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: December 8, 2000
Last modified: December 9, 2015
This is version 99 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.