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Protein
Submitted name:

Amylase

Gene
N/A
Organism
Bacillus sp.
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi137Calcium 1UniRule annotationCombined sources1
Metal bindingi194Calcium 2UniRule annotationCombined sources1
Binding sitei197GlucoseCombined sources1
Metal bindingi217Calcium 2; via carbonyl oxygenUniRule annotationCombined sources1
Metal bindingi219Calcium 2UniRule annotationCombined sources1
Binding sitei225GlucoseCombined sources1
Metal bindingi230Calcium 1UniRule annotationCombined sources1
Binding sitei234GlucoseCombined sources1
Metal bindingi236Calcium 1UniRule annotationCombined sources1
Metal bindingi238Calcium 2UniRule annotationCombined sources1
Metal bindingi240Calcium 2Combined sources1
Active sitei267NucleophileUniRule annotation1
Binding sitei270GlucoseCombined sources1
Metal bindingi271Calcium 1; via carbonyl oxygenUniRule annotationCombined sources1
Active sitei297Proton donorUniRule annotation1
Metal bindingi336Calcium 3; via carbonyl oxygenUniRule annotationCombined sources1
Metal bindingi336Calcium 4; via carbonyl oxygenCombined sources1
Metal bindingi338Calcium 3; via carbonyl oxygenCombined sources1
Metal bindingi439Calcium 3; via carbonyl oxygenCombined sources1
Metal bindingi439Calcium 4; via carbonyl oxygenCombined sources1
Metal bindingi440Calcium 3UniRule annotationCombined sources1
Metal bindingi463Calcium 3UniRule annotationCombined sources1
Metal bindingi463Calcium 4Combined sources1

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandCalciumUniRule annotationCombined sources, Metal-bindingUniRule annotationCombined sources

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
AmylaseImported
OrganismiBacillus sp.Imported
Taxonomic identifieri1409 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Pathology & Biotechi

Chemistry databases

DrugBankiDB02379. Beta-D-Glucose.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 31Sequence analysisAdd BLAST31
ChainiPRO_500416024132 – 516Sequence analysisAdd BLAST485

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1W9XX-ray2.10A36-515[»]
2DIEX-ray2.10A32-516[»]
ProteinModelPortaliO82839.
SMRiO82839.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiO82839.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini38 – 424AamyInterPro annotationAdd BLAST387

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiView protein in InterPro
IPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

O82839-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLHNRIISV LLTLLLAVAV LFPYMTEPAQ AHHNGTNGTM MQYFEWHLPN
60 70 80 90 100
DGNHWNRLRD DAANLKSKGI TAVWIPPAWK GTSQNDVGYG AYDLYDLGEF
110 120 130 140 150
NQKGTVRTKY GTRSQLQGAV TSLKNNGIQV YGDVVMNHKG GADGTEMVNA
160 170 180 190 200
VEVNRSNRNQ EISGEYTIEA WTKFDFPGRG NTHSNFKWRW YHFDGTDWDQ
210 220 230 240 250
SRQLQNKIYK FRGTGKAWDW EVDIENGNYD YLMYADIDMD HPEVINELRN
260 270 280 290 300
WGVWYTNTLN LDGFRIDAVK HIKYSYTRDW LTHVRNTTGK PMFAVAEFWK
310 320 330 340 350
NDLAAIENYL NKTSWNHSVF DVPLHYNLYN ASNSGGYFDM RNILNGSVVQ
360 370 380 390 400
KHPIHAVTFV DNHDSQPGEA LESFVQSWFK PLAYALILTR EQGYPSVFYG
410 420 430 440 450
DYYGIPTHGV PSMKSKIDPL LQARQTYAYG TQHDYFDHHD IIGWTREGDS
460 470 480 490 500
SHPNSGLATI MSDGPGGNKW MYVGKHKAGQ VWRDITGNRS GTVTINADGW
510
GNFTVNGGAV SVWVKQ
Length:516
Mass (Da):58,842
Last modified:November 1, 1998 - v1
Checksum:iD90A8C90ECC182F8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB008763 Genomic DNA. Translation: BAA32431.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB008763 Genomic DNA. Translation: BAA32431.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1W9XX-ray2.10A36-515[»]
2DIEX-ray2.10A32-516[»]
ProteinModelPortaliO82839.
SMRiO82839.
ModBaseiSearch...
MobiDBiSearch...

Chemistry databases

DrugBankiDB02379. Beta-D-Glucose.

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Miscellaneous databases

EvolutionaryTraceiO82839.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiView protein in InterPro
IPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiO82839_BACSP
AccessioniPrimary (citable) accession number: O82839
Entry historyiIntegrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: March 15, 2017
This is version 82 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.