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Protein
Submitted name:

T2L5.9 protein

Gene

T2L5.9

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
T2L5.9 proteinImported
Gene namesi
Name:T2L5.9Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

PTM / Processingi

Proteomic databases

PRIDEiO82607.

Structurei

3D structure databases

ProteinModelPortaliO82607.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini584 – 750167Integrase catalyticInterPro annotationAdd
BLAST

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
InterProiIPR025724. GAG-pre-integrase_dom.
IPR001584. Integrase_cat-core.
IPR005162. Retrotrans_gag_dom.
IPR012337. RNaseH-like_dom.
IPR013103. RVT_2.
[Graphical view]
PfamiPF13976. gag_pre-integrs. 1 hit.
PF03732. Retrotrans_gag. 1 hit.
PF00665. rve. 1 hit.
PF07727. RVT_2. 2 hits.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
PROSITEiPS50994. INTEGRASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O82607-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVAVARVTRK STRSKASISS VPWKSSRSTG LTVSPPISPP AVDLLSAGAS
60 70 80 90 100
RAVVTSDSMD PTQSPFFMHS GDHPALRISL DAKNKIGFVD GSLPRPLESD
110 120 130 140 150
GNFRLWSRCN SMVKSWLLNS VSPQIYRSIL RMNDATDIWR DIYGRFHMTN
160 170 180 190 200
LPRTYNLTQE IQDFRQGSLS LSEYYTQLRI LWDLLDSTEE PDDPCTCGKV
210 220 230 240 250
LRLQQKAERA KTVKFLAGLN ESYSIVRRQI IAKKALPSLV EVYNILDQDY
260 270 280 290 300
SQKGFSTNVS PPAAFQVSKI SSTALTPKIC YVQNGPNKGR PICSFCNKVG
310 320 330 340 350
HIAEKCYKKH GYPPGFKGKL PEKGTKPQPV AAQVSLLPPM VPTQATLDGL
360 370 380 390 400
LGNLSNDQLQ NFIALFSSQL KSQPTASSSD AGISRSPIDY TGISFSNSTY
410 420 430 440 450
YFVGILNVSQ HTLSTETWVI DSGATHHVCH DKSLFVSLDH SVVSYVNLPT
460 470 480 490 500
GSRVKISGVG SVQINENILL RNVLFLPEFR LNLISISSLT SDIGSRVIFD
510 520 530 540 550
PSCCEIQDLT KDLRIGRGRR IGNLYVLDTT PPLDSVSVNA VVDVSLWHMR
560 570 580 590 600
MGHPAYSRLD AISDILRTTK HKNKGSAYCH ICHLAKQKKL SFQSSNNILE
610 620 630 640 650
TIDGFKYFLT IVDDHSRATW VYLLKTKSEV LSVFPAFVTR VENQYNVKVK
660 670 680 690 700
AVRSDNAQEL KFTEFYKAKG IVSYHSCPET PEQNSVVERK HQHILNVARA
710 720 730 740 750
LMFQSKVRNL IMSRFAPLDV YVMVLLLLLN VTSFSLELGH ASFWVNRLAT
760 770 780 790 800
KGTRSWIWKA IKSSFPEMLP FMRQSFQWHH HTLLTLHPLS HQWILCPEFH
810 820 830 840 850
ADGSLERHKA RLVAKGYTQK EGLDYTDTFS PVAKMATIKM LLKISASKKW
860 870 880 890 900
FLTQLDVSNA FLNGDLEEDI YMRLPEGYAD NKGDQLPKNV VLRLKKTIYG
910 920 930 940 950
LKQASRHGDH TLFVRCFGGE FLAVLVYVDD IVIASTIEGV AAQLTNALKE
960 970 980 990 1000
SFKLRDLGPL KYFLGLEIAR TAAGISICQR KYALELLAFT GMLDCKPSTI
1010 1020 1030 1040 1050
PMVPNLKLSK ADGELLEDRE FYRSLVGKLM YLTITRPDIT FAVNKLCQYS
1060 1070 1080 1090 1100
AAPRTSHLTT VYKVLQYIKG TVGQGLFYSS DPDLTLKGFA DSDWGTCPDT
1110 1120 1130 1140 1150
RRSTTGLTMF LGSSLITWRS KKQPTVSRSS AEAEYRALAL ASCEMVWLAS
1160 1170 1180 1190 1200
LLLDLKIITG SVPIVFSDST AAIYIATNPV FHERTKHIEI DCHLVRERLD
1210 1220 1230 1240
KGLIRMLHVR TEDQVADILT KPLFPHQFSY LMSKMSLHNI FASS
Length:1,244
Mass (Da):139,339
Last modified:November 1, 1998 - v1
Checksum:iC2B34A4A509B5C80
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF096371 Genomic DNA. Translation: AAC62795.1.
PIRiT01956.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF096371 Genomic DNA. Translation: AAC62795.1.
PIRiT01956.

3D structure databases

ProteinModelPortaliO82607.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiO82607.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
InterProiIPR025724. GAG-pre-integrase_dom.
IPR001584. Integrase_cat-core.
IPR005162. Retrotrans_gag_dom.
IPR012337. RNaseH-like_dom.
IPR013103. RVT_2.
[Graphical view]
PfamiPF13976. gag_pre-integrs. 1 hit.
PF03732. Retrotrans_gag. 1 hit.
PF00665. rve. 1 hit.
PF07727. RVT_2. 2 hits.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
PROSITEiPS50994. INTEGRASE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The A. thaliana Genome Sequencing Project."
    WashU
    Submitted (OCT-1998) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "The sequence of A. thaliana T2L5."
    Geisel C., Smith A., Le T.
    Submitted (OCT-1998) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  3. Waterston R.
    Submitted (OCT-1998) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiO82607_ARATH
AccessioniPrimary (citable) accession number: O82607
Entry historyi
Integrated into UniProtKB/TrEMBL: November 1, 1998
Last sequence update: November 1, 1998
Last modified: June 8, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.