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Protein

Putative disease resistance protein At4g11170

Gene

At4g11170

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • defense response Source: UniProtKB-KW
  • response to ozone Source: TAIR
  • signal transduction Source: InterPro
Complete GO annotation...

Keywords - Biological processi

Plant defense

Names & Taxonomyi

Protein namesi
Recommended name:
Putative disease resistance protein At4g11170
Gene namesi
Ordered Locus Names:At4g11170
ORF Names:F2P3.8, T22B4.150
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

TAIRiAT4G11170.

Subcellular locationi

GO - Cellular componenti

  • mitochondrion Source: TAIR
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 10951095Putative disease resistance protein At4g11170PRO_0000262928Add
BLAST

Proteomic databases

PaxDbiO82500.
PRIDEiO82500.

Expressioni

Gene expression databases

GenevisibleiO82500. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT4G11170.1.

Structurei

3D structure databases

ProteinModelPortaliO82500.
SMRiO82500. Positions 11-169, 544-820.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini9 – 147139TIRPROSITE-ProRule annotationAdd
BLAST
Domaini168 – 454287NB-ARCAdd
BLAST
Repeati609 – 63123LRR 1Add
BLAST
Repeati632 – 65423LRR 2Add
BLAST
Repeati655 – 67723LRR 3Add
BLAST
Repeati679 – 70123LRR 4Add
BLAST
Repeati702 – 72221LRR 5Add
BLAST
Repeati723 – 74422LRR 6Add
BLAST

Sequence similaritiesi

Contains 6 LRR (leucine-rich) repeats.Curated
Contains 1 NB-ARC domain.Curated
Contains 1 TIR domain.PROSITE-ProRule annotation

Keywords - Domaini

Leucine-rich repeat, Repeat

Phylogenomic databases

eggNOGiENOG410JV26. Eukaryota.
ENOG41106B0. LUCA.
HOGENOMiHOG000064702.
InParanoidiO82500.
OMAiWCESLVE.
PhylomeDBiO82500.

Family and domain databases

Gene3Di3.40.50.10140. 1 hit.
3.40.50.300. 1 hit.
3.80.10.10. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR032675. L_dom-like.
IPR011713. Leu-rich_rpt_3.
IPR002182. NB-ARC.
IPR027417. P-loop_NTPase.
IPR000157. TIR_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF07725. LRR_3. 1 hit.
PF00931. NB-ARC. 1 hit.
PF01582. TIR. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
SM00255. TIR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF52058. SSF52058. 1 hit.
SSF52200. SSF52200. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS50104. TIR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O82500-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASSSSNSWR YDVFPSFRGE DVRNNFLSHL LKEFESKGIV TFRDDHIKRS
60 70 80 90 100
HTIGHELRAA IRESKISVVL FSENYASSSW CLDELIEIMK CKEEQGLKVM
110 120 130 140 150
PVFYKVDPSD IRKQTGKFGM SFLETCCGKT EERQHNWRRA LTDAANILGD
160 170 180 190 200
HPQNWDNEAY KITTISKDVL EKLNATPSRD FNDLVGMEAH IAKMESLLCL
210 220 230 240 250
ESQGVRIVGI WGPAGVGKTT IARALYNQYH ENFNLSIFME NVRESYGEAG
260 270 280 290 300
LDDYGLKLHL QQRFLSKLLD QKDLRVRHLG AIEERLKSQK VLIILDDVDN
310 320 330 340 350
IEQLKALAKE NQWFGNKSRI VVTTQNKQLL VSHDINHMYQ VAYPSKQEAL
360 370 380 390 400
TIFCQHAFKQ SSPSDDLKHL AIEFTTLAGH LPLALRVLGS FMRGKGKEEW
410 420 430 440 450
EFSLPTLKSR LDGEVEKVLK VGYDGLHDHE KDLFLHIACI FSGQHENYLK
460 470 480 490 500
QMIIANNDTY VSFGLQVLAD KSLIQKFENG RIEMHSLLRQ LGKEVVRKQS
510 520 530 540 550
IYEPGKRQFL MNAKETCGVL SNNTGTGTVL GISLDMCEIK EELYISEKTF
560 570 580 590 600
EEMRNLVYLK FYMSSPIDDK MKVKLQLPEE GLSYLPQLRL LHWDAYPLEF
610 620 630 640 650
FPSSFRPECL VELNMSHSKL KKLWSGVQPL RNLRTMNLNS SRNLEILPNL
660 670 680 690 700
MEATKLNRLD LGWCESLVEL PSSIKNLQHL ILLEMSCCKK LEIIPTNINL
710 720 730 740 750
PSLEVLHFRY CTRLQTFPEI STNIRLLNLI GTAITEVPPS VKYWSKIDEI
760 770 780 790 800
CMERAKVKRL VHVPYVLEKL CLRENKELET IPRYLKYLPR LQMIDISYCI
810 820 830 840 850
NIISLPKLPG SVSALTAVNC ESLQILHGHF RNKSIHLNFI NCLKLGQRAQ
860 870 880 890 900
EKIHRSVYIH QSSYIADVLP GEHVPAYFSY RSTGSSIMIH SNKVDLSKFN
910 920 930 940 950
RFKVCLVLGA GKRFEGCDIK FYKQFFCKPR EYYVPKHLDS PLLKSDHLCM
960 970 980 990 1000
CEFELMPPHP PTEWELLHPN EFLEVSFESR GGLYKCEVKE CGLQFLEPHE
1010 1020 1030 1040 1050
TSEFRYLSPH LYLGGSWIGN SSSSIEEIIH VDQEESSSDS EEIIYADQEE
1060 1070 1080 1090
SSSGIEEIIH AEREGTNRRK SVMRWIKVGA RKMGLSLECL KPWTR
Length:1,095
Mass (Da):126,083
Last modified:November 1, 1998 - v1
Checksum:iC18F6D90F2EEC62A
GO

Sequence cautioni

The sequence CAB43052.1 differs from that shown. Reason: Erroneous gene model prediction. The predicted gene At4g11170 has been split into 2 genes: At4g11170 and At4g11175.Curated
The sequence CAB81218.1 differs from that shown. Reason: Erroneous gene model prediction. The predicted gene At4g11170 has been split into 2 genes: At4g11170 and At4g11175.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF080120 Genomic DNA. Translation: AAC35544.1.
AL049876 Genomic DNA. Translation: CAB43052.1. Sequence problems.
AL161531 Genomic DNA. Translation: CAB81218.1. Sequence problems.
CP002687 Genomic DNA. Translation: AEE82980.1.
PIRiT01916.
T08196.
RefSeqiNP_192855.1. NM_117187.1.
UniGeneiAt.49404.

Genome annotation databases

EnsemblPlantsiAT4G11170.1; AT4G11170.1; AT4G11170.
GeneIDi826718.
GrameneiAT4G11170.1; AT4G11170.1; AT4G11170.
KEGGiath:AT4G11170.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF080120 Genomic DNA. Translation: AAC35544.1.
AL049876 Genomic DNA. Translation: CAB43052.1. Sequence problems.
AL161531 Genomic DNA. Translation: CAB81218.1. Sequence problems.
CP002687 Genomic DNA. Translation: AEE82980.1.
PIRiT01916.
T08196.
RefSeqiNP_192855.1. NM_117187.1.
UniGeneiAt.49404.

3D structure databases

ProteinModelPortaliO82500.
SMRiO82500. Positions 11-169, 544-820.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT4G11170.1.

Proteomic databases

PaxDbiO82500.
PRIDEiO82500.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G11170.1; AT4G11170.1; AT4G11170.
GeneIDi826718.
GrameneiAT4G11170.1; AT4G11170.1; AT4G11170.
KEGGiath:AT4G11170.

Organism-specific databases

TAIRiAT4G11170.

Phylogenomic databases

eggNOGiENOG410JV26. Eukaryota.
ENOG41106B0. LUCA.
HOGENOMiHOG000064702.
InParanoidiO82500.
OMAiWCESLVE.
PhylomeDBiO82500.

Miscellaneous databases

PROiO82500.

Gene expression databases

GenevisibleiO82500. AT.

Family and domain databases

Gene3Di3.40.50.10140. 1 hit.
3.40.50.300. 1 hit.
3.80.10.10. 1 hit.
InterProiIPR003593. AAA+_ATPase.
IPR032675. L_dom-like.
IPR011713. Leu-rich_rpt_3.
IPR002182. NB-ARC.
IPR027417. P-loop_NTPase.
IPR000157. TIR_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF07725. LRR_3. 1 hit.
PF00931. NB-ARC. 1 hit.
PF01582. TIR. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
SM00255. TIR. 1 hit.
[Graphical view]
SUPFAMiSSF46785. SSF46785. 1 hit.
SSF52058. SSF52058. 1 hit.
SSF52200. SSF52200. 1 hit.
SSF52540. SSF52540. 1 hit.
PROSITEiPS50104. TIR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana."
    Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G., Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N., Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M., Weichselgartner M., de Simone V., Obermaier B.
    , Mache R., Mueller M., Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T., Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I., Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P., Langham S.-A., McCullagh B., Bilham L., Robben J., van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F., Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E., Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M., Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H., De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R., van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S., Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R., Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S., Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H., Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A., Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E., Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R., Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S., Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E., Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A., Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T., Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C., Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S., Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K., Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L., Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J., Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J., Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D., Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K., Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W., Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D., Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C., Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C., Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R., Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S., Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A., Chen E., Marra M.A., Martienssen R., McCombie W.R.
    Nature 402:769-777(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.

Entry informationi

Entry nameiY4117_ARATH
AccessioniPrimary (citable) accession number: O82500
Secondary accession number(s): Q9T016
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: November 1, 1998
Last modified: February 17, 2016
This is version 112 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.