Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Putative disease resistance protein At4g10780

Gene

At4g10780

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Potential disease resistance protein.By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi180 – 187ATPSequence analysis8

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Plant defense

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Putative disease resistance protein At4g10780
Gene namesi
Ordered Locus Names:At4g10780
ORF Names:T12H20.8
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

TAIRiAT4G10780.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00002127552 – 892Putative disease resistance protein At4g10780Add BLAST891

Proteomic databases

PaxDbiO82484.
PRIDEiO82484.

Expressioni

Gene expression databases

GenevisibleiO82484. AT.

Interactioni

Protein-protein interaction databases

BioGridi11973. 1 interactor.
MINTiMINT-8069937.
STRINGi3702.AT4G10780.1.

Structurei

3D structure databases

ProteinModelPortaliO82484.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini137 – 440NB-ARCAdd BLAST304
Repeati515 – 536LRR 1Add BLAST22
Repeati537 – 559LRR 2Add BLAST23
Repeati562 – 584LRR 3Add BLAST23
Repeati586 – 608LRR 4Add BLAST23
Repeati609 – 631LRR 5Add BLAST23
Repeati632 – 654LRR 6Add BLAST23

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili24 – 63Sequence analysisAdd BLAST40

Domaini

The LRR repeats probably act as specificity determinant of pathogen recognition.By similarity

Sequence similaritiesi

Belongs to the disease resistance NB-LRR family.Curated
Contains 6 LRR (leucine-rich) repeats.Curated
Contains 1 NB-ARC domain.Curated

Keywords - Domaini

Coiled coil, Leucine-rich repeat, Repeat

Phylogenomic databases

eggNOGiKOG4658. Eukaryota.
COG4886. LUCA.
HOGENOMiHOG000238348.
InParanoidiO82484.
OMAiWNCEISE.
OrthoDBiEOG093602JL.
PhylomeDBiO82484.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
3.80.10.10. 2 hits.
InterProiIPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
IPR002182. NB-ARC.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF13855. LRR_8. 1 hit.
PF00931. NB-ARC. 1 hit.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 1 hit.
SSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O82484-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGSCISLQIS CDQVLTRAYS CFFSLGNYIH KLKDNIVALE KAIEDLTATR
60 70 80 90 100
DDVLRRVQME EGKGLERLQQ VQVWLKRVEI IRNQFYDLLS ARNIEIQRLC
110 120 130 140 150
FYSNCSTNLS SSYTYGQRVF LMIKEVENLN SNGFFEIVAA PAPKLEMRPI
160 170 180 190 200
QPTIMGRETI FQRAWNRLMD DGVGTMGLYG MGGVGKTTLL TQIHNTLHDT
210 220 230 240 250
KNGVDIVIWV VVSSDLQIHK IQEDIGEKLG FIGKEWNKKQ ESQKAVDILN
260 270 280 290 300
CLSKKRFVLL LDDIWKKVDL TKIGIPSQTR ENKCKVVFTT RSLDVCARMG
310 320 330 340 350
VHDPMEVQCL STNDAWELFQ EKVGQISLGS HPDILELAKK VAGKCRGLPL
360 370 380 390 400
ALNVIGETMA GKRAVQEWHH AVDVLTSYAA EFSGMDDHIL LILKYSYDNL
410 420 430 440 450
NDKHVRSCFQ YCALYPEDYS IKKYRLIDYW ICEGFIDGNI GKERAVNQGY
460 470 480 490 500
EILGTLVRAC LLSEEGKNKL EVKMHDVVRE MALWTLSDLG KNKERCIVQA
510 520 530 540 550
GSGLRKVPKV EDWGAVRRLS LMNNGIEEIS GSPECPELTT LFLQENKSLV
560 570 580 590 600
HISGEFFRHM RKLVVLDLSE NHQLDGLPEQ ISELVALRYL DLSHTNIEGL
610 620 630 640 650
PACLQDLKTL IHLNLECMRR LGSIAGISKL SSLRTLGLRN SNIMLDVMSV
660 670 680 690 700
KELHLLEHLE ILTIDIVSTM VLEQMIDAGT LMNCMQEVSI RCLIYDQEQD
710 720 730 740 750
TKLRLPTMDS LRSLTMWNCE ISEIEIERLT WNTNPTSPCF FNLSQVIIHV
760 770 780 790 800
CSSLKDLTWL LFAPNITYLM IEQLEQLQEL ISHAKATGVT EEEQQQLHKI
810 820 830 840 850
IPFQKLQILH LSSLPELKSI YWISLSFPCL SGIYVERCPK LRKLPLDSKT
860 870 880 890
GTVGKKFVLQ YKETEWIESV EWKDEATKLH FLPSTKLVYI LS
Length:892
Mass (Da):101,802
Last modified:November 1, 1998 - v1
Checksum:iFC337F081EDB357B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF080119 Genomic DNA. Translation: AAC35528.1.
AL161518 Genomic DNA. Translation: CAB81179.1.
CP002687 Genomic DNA. Translation: AEE82928.1.
PIRiT01899.
RefSeqiNP_192816.1. NM_117146.1.
UniGeneiAt.65351.

Genome annotation databases

EnsemblPlantsiAT4G10780.1; AT4G10780.1; AT4G10780.
GeneIDi826674.
GrameneiAT4G10780.1; AT4G10780.1; AT4G10780.
KEGGiath:AT4G10780.

Cross-referencesi

Web resourcesi

NIB-LRRS

Functional and comparative genomics of disease resistance gene homologs

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF080119 Genomic DNA. Translation: AAC35528.1.
AL161518 Genomic DNA. Translation: CAB81179.1.
CP002687 Genomic DNA. Translation: AEE82928.1.
PIRiT01899.
RefSeqiNP_192816.1. NM_117146.1.
UniGeneiAt.65351.

3D structure databases

ProteinModelPortaliO82484.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi11973. 1 interactor.
MINTiMINT-8069937.
STRINGi3702.AT4G10780.1.

Proteomic databases

PaxDbiO82484.
PRIDEiO82484.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT4G10780.1; AT4G10780.1; AT4G10780.
GeneIDi826674.
GrameneiAT4G10780.1; AT4G10780.1; AT4G10780.
KEGGiath:AT4G10780.

Organism-specific databases

TAIRiAT4G10780.

Phylogenomic databases

eggNOGiKOG4658. Eukaryota.
COG4886. LUCA.
HOGENOMiHOG000238348.
InParanoidiO82484.
OMAiWNCEISE.
OrthoDBiEOG093602JL.
PhylomeDBiO82484.

Miscellaneous databases

PROiO82484.

Gene expression databases

GenevisibleiO82484. AT.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
3.80.10.10. 2 hits.
InterProiIPR032675. L_dom-like.
IPR001611. Leu-rich_rpt.
IPR002182. NB-ARC.
IPR027417. P-loop_NTPase.
[Graphical view]
PfamiPF13855. LRR_8. 1 hit.
PF00931. NB-ARC. 1 hit.
[Graphical view]
SUPFAMiSSF52058. SSF52058. 1 hit.
SSF52540. SSF52540. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiDRL23_ARATH
AccessioniPrimary (citable) accession number: O82484
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 13, 2004
Last sequence update: November 1, 1998
Last modified: November 2, 2016
This is version 112 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.