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O82475 (SPE1_BRAJU) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 71. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Arginine decarboxylase

Short name=ADC
Short name=ARGDC
EC=4.1.1.19
Gene names
Name:ADC1
OrganismBrassica juncea (Indian mustard) (Sinapis juncea)
Taxonomic identifier3707 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeBrassiceaeBrassica

Protein attributes

Sequence length702 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

L-arginine = agmatine + CO2.

Cofactor

Pyridoxal phosphate.

Magnesium.

Pathway

Amine and polyamine biosynthesis; agmatine biosynthesis; agmatine from L-arginine: step 1/1.

Sequence similarities

Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 702702Arginine decarboxylase
PRO_0000149949

Regions

Region325 – 33511Substrate-binding By similarity

Amino acid modifications

Modified residue1411N6-(pyridoxal phosphate)lysine By similarity

Sequences

Sequence LengthMass (Da)Tools
O82475 [UniParc].

Last modified November 1, 1998. Version 1.
Checksum: 4FF22C7A8D1B1B92

FASTA70276,188
        10         20         30         40         50         60 
MPALALVDTP VDAFSGDCSG VFIPPSPNSS SASLDWSPSL SSSLYRIDGW GAPYFAANSS 

        70         80         90        100        110        120 
GNISVRPHGS NTMPHQEIDL TKVVKKATDP KSSGGLALQF PLIVRFPDVL KNRLESLQSA 

       130        140        150        160        170        180 
FEFAIQTQGY ESRYQGVYPV KCNQDRFIIE DIVEFGSSFR FGLEAGSKPE ILLAMSCLCK 

       190        200        210        220        230        240 
GSPEAFLVCN GFKDAEYVSL ALLGRKLQLN TVIVLEQEEE LDLVIALSKK VNVRPVIGLR 

       250        260        270        280        290        300 
AKLRTKHSGH FGSTSGEKGK FGLTTVQIIR VVRKLRDVGM LDCLQLLHFH IGSQIPSTAL 

       310        320        330        340        350        360 
LSDGVSEAAQ LYCELVRLGA RMEVIDIGGG LGIDYDGSKS GESDLSVAYS LEEYAAAVVA 

       370        380        390        400        410        420 
SVRFVCDQKS VKHPVICSES GRAIVSHHSV LIFEAVSAGK RHETTPSDLQ FLLEGYSEEA 

       430        440        450        460        470        480 
RGDYENLYDA VMRGDRESCL LYVDQLKQRC VEEFKEGSLS IEQLAGVDGL CEWVTKEIGG 

       490        500        510        520        530        540 
SDPVLTYNVN LSVFHSIPDF WGIDQLFPIV PIHRLDQRPV ARGILSDLTC DSDGKINKFI 

       550        560        570        580        590        600 
GGESSLPLHE LDNNGYYLGM FLGGAYEEAL GGVHNLFGGP SVVRVLQKDG PHGFAVTRAM 

       610        620        630        640        650        660 
MGQSSADVLR AMQHEPELMF QTLKHRAEEL SLVHKPGGDK GNDKLVASCL ARSFNNMPYL 

       670        680        690        700 
SVGTSTNALT AAINNLVYYS DEAAVGNGGG CGKNGKWSYS VD 

« Hide

References

[1]"Molecular cloning of an arginine decarboxylase cDNA from mustard (Brassica juncea [L.] Czern & Coss)."
Mo H., Pua E.-C.
Plant Gene Register PGR98-160
Cited for: NUCLEOTIDE SEQUENCE [MRNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF077547 mRNA. Translation: AAC62017.1.

3D structure databases

ProteinModelPortalO82475.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEO82475.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Enzyme and pathway databases

UniPathwayUPA00186; UER00284.

Family and domain databases

Gene3D2.40.37.10. 2 hits.
InterProIPR009006. Ala_racemase/Decarboxylase_C.
IPR002985. Arg_decrbxlase.
IPR022643. De-COase2_C.
IPR022657. De-COase2_CS.
IPR022644. De-COase2_N.
IPR022653. De-COase2_pyr-phos_BS.
IPR000183. Orn/DAP/Arg_de-COase.
[Graphical view]
PfamPF02784. Orn_Arg_deC_N. 1 hit.
PF00278. Orn_DAP_Arg_deC. 1 hit.
[Graphical view]
PIRSFPIRSF001336. Arg_decrbxlase. 1 hit.
PRINTSPR01180. ARGDCRBXLASE.
PR01179. ODADCRBXLASE.
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR01273. speA. 1 hit.
PROSITEPS00878. ODR_DC_2_1. 1 hit.
PS00879. ODR_DC_2_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSPE1_BRAJU
AccessionPrimary (citable) accession number: O82475
Entry history
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: November 1, 1998
Last modified: February 19, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways