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O82451

- GSTF2_ORYSJ

UniProt

O82451 - GSTF2_ORYSJ

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Protein

Probable glutathione S-transferase GSTF2

Gene

GSTF2

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at protein leveli

Functioni

Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles.

Catalytic activityi

RX + glutathione = HX + R-S-glutathione.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei12 – 121GlutathioneBy similarity

GO - Molecular functioni

  1. glutathione transferase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

Transferase

Names & Taxonomyi

Protein namesi
Recommended name:
Probable glutathione S-transferase GSTF2 (EC:2.5.1.18)
Alternative name(s):
GST-II
Gene namesi
Name:GSTF2
Synonyms:RGST II
Ordered Locus Names:Os01g0764000, LOC_Os01g55830
ORF Names:P0403C05.5
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 1

Organism-specific databases

GrameneiO82451.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed1 Publication
Chaini2 – 215214Probable glutathione S-transferase GSTF2PRO_0000185845Add
BLAST

Proteomic databases

PaxDbiO82451.

Expressioni

Tissue specificityi

Constitutively expressed in roots. Expressed in anthers, callus, panicles, sheaths and stems (at protein level).2 Publications

Inductioni

By the herbicide safener fenclorim. By drought stress.2 Publications

Gene expression databases

ExpressionAtlasiO82451. baseline.

Structurei

3D structure databases

ProteinModelPortaliO82451.
SMRiO82451. Positions 2-215.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini2 – 8382GST N-terminalAdd
BLAST
Domaini88 – 215128GST C-terminalAdd
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni41 – 422Glutathione bindingBy similarity
Regioni54 – 552Glutathione bindingBy similarity
Regioni67 – 682Glutathione bindingBy similarity

Sequence similaritiesi

Belongs to the GST superfamily. Phi family.Curated
Contains 1 GST C-terminal domain.Curated
Contains 1 GST N-terminal domain.Curated

Phylogenomic databases

eggNOGiCOG0625.
HOGENOMiHOG000125746.
InParanoidiO82451.
OMAiRAICKYA.

Family and domain databases

Gene3Di1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProiIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR004046. GST_C.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamiPF00043. GST_C. 1 hit.
PF02798. GST_N. 1 hit.
[Graphical view]
SUPFAMiSSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEiPS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O82451-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAPMKLYGST LSWNVTRCVA VLEEAGAEYE IVPLDFSKGE HKAPDHLARN
60 70 80 90 100
PFGQVPALQD GDLFLWESRA ICKYVCRKNK PELLKDGDLK ESAMVDVWLE
110 120 130 140 150
VESNQYTPAL NPILFQCLIR PMMFGAPPDE KVVEENLEKL KKVLEVYEAR
160 170 180 190 200
LTKCKYLAGD YISVADLSHV AGTVCLGATP HASVLDAYPH VKAWWTDLMA
210
RPSSQKVASL MKPPA
Length:215
Mass (Da):23,977
Last modified:January 23, 2007 - v3
Checksum:iF956905A623D07D0
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti190 – 1901H → Q in CAA05355. 1 PublicationCurated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF062403 mRNA. Translation: AAC64007.1.
AP003239 Genomic DNA. Translation: BAB63585.1.
AK058894 mRNA. No translation available.
AK059818 mRNA. No translation available.
AK099142 mRNA. No translation available.
AJ002381 mRNA. Translation: CAA05355.1.
PIRiT03989.
RefSeqiNP_001044339.1. NM_001050874.1.
UniGeneiOs.2241.

Genome annotation databases

EnsemblPlantsiOS01T0764000-01; OS01T0764000-01; OS01G0764000.
OS01T0764000-03; OS01T0764000-03; OS01G0764000.
GeneIDi4326887.
KEGGiosa:4326887.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF062403 mRNA. Translation: AAC64007.1 .
AP003239 Genomic DNA. Translation: BAB63585.1 .
AK058894 mRNA. No translation available.
AK059818 mRNA. No translation available.
AK099142 mRNA. No translation available.
AJ002381 mRNA. Translation: CAA05355.1 .
PIRi T03989.
RefSeqi NP_001044339.1. NM_001050874.1.
UniGenei Os.2241.

3D structure databases

ProteinModelPortali O82451.
SMRi O82451. Positions 2-215.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PaxDbi O82451.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi OS01T0764000-01 ; OS01T0764000-01 ; OS01G0764000 .
OS01T0764000-03 ; OS01T0764000-03 ; OS01G0764000 .
GeneIDi 4326887.
KEGGi osa:4326887.

Organism-specific databases

Gramenei O82451.

Phylogenomic databases

eggNOGi COG0625.
HOGENOMi HOG000125746.
InParanoidi O82451.
OMAi RAICKYA.

Gene expression databases

ExpressionAtlasi O82451. baseline.

Family and domain databases

Gene3Di 1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProi IPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR004046. GST_C.
IPR012336. Thioredoxin-like_fold.
[Graphical view ]
Pfami PF00043. GST_C. 1 hit.
PF02798. GST_N. 1 hit.
[Graphical view ]
SUPFAMi SSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEi PS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Isolation of a full-length cDNA encoding the second glutathione S-transferase from rice (Oryza sativa)."
    Wu J., Cramer C., Hatzios K.K.
    Plant Gene Register PGR98-136
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: cv. Lemont.
    Tissue: Root.
  2. "The genome sequence and structure of rice chromosome 1."
    Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.
    , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.
    Nature 420:312-316(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.
  4. "Rice proteome database based on two-dimensional polyacrylamide gel electrophoresis: its status in 2003."
    Komatsu S., Kojima K., Suzuki K., Ozaki K., Higo K.
    Nucleic Acids Res. 32:D388-D392(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 2-11, TISSUE SPECIFICITY.
    Strain: cv. Nipponbare.
    Tissue: Anther, Callus, Panicle, Root, Sheath and Stem.
  5. "Nucleotide sequence of a cDNA encoding the second glutathione S-transferase from rice (Oryza sativa)."
    Wu J., Cramer C., Hatzios K.K.
    Plant Gene Register PGR98-119
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 50-195.
    Strain: cv. Lemont.
  6. "Characterization of two cDNAs encoding glutathione S-transferases in rice and induction of their transcripts by the herbicide safener fenclorim."
    Wu J., Cramer C., Hatzios K.K.
    Physiol. Plantarum 105:102-108(1999)
    Cited for: CHARACTERIZATION, TISSUE SPECIFICITY, INDUCTION.
    Strain: cv. Lemont.
  7. "Organisation and structural evolution of the rice glutathione S-transferase gene family."
    Soranzo N., Sari Gorla M., Mizzi L., De Toma G., Frova C.
    Mol. Genet. Genomics 271:511-521(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NOMENCLATURE, INDUCTION.

Entry informationi

Entry nameiGSTF2_ORYSJ
AccessioniPrimary (citable) accession number: O82451
Secondary accession number(s): O65858, Q7F5M8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 4, 2005
Last sequence update: January 23, 2007
Last modified: October 29, 2014
This is version 83 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3