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O82451

- GSTF2_ORYSJ

UniProt

O82451 - GSTF2_ORYSJ

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Protein
Probable glutathione S-transferase GSTF2
Gene
GSTF2, RGST II, Os01g0764000, LOC_Os01g55830, P0403C05.5
Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5 - Experimental evidence at protein leveli

Functioni

Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles.

Catalytic activityi

RX + glutathione = HX + R-S-glutathione.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei12 – 121Glutathione By similarity

GO - Molecular functioni

  1. glutathione transferase activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

    Complete GO annotation...

    Keywords - Molecular functioni

    Transferase

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable glutathione S-transferase GSTF2 (EC:2.5.1.18)
    Alternative name(s):
    GST-II
    Gene namesi
    Name:GSTF2
    Synonyms:RGST II
    Ordered Locus Names:Os01g0764000, LOC_Os01g55830
    ORF Names:P0403C05.5
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 1

    Organism-specific databases

    GrameneiO82451.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11Removed1 Publication
    Chaini2 – 215214Probable glutathione S-transferase GSTF2
    PRO_0000185845Add
    BLAST

    Proteomic databases

    PaxDbiO82451.

    Expressioni

    Tissue specificityi

    Constitutively expressed in roots. Expressed in anthers, callus, panicles, sheaths and stems (at protein level).2 Publications

    Inductioni

    By the herbicide safener fenclorim. By drought stress.2 Publications

    Structurei

    3D structure databases

    ProteinModelPortaliO82451.
    SMRiO82451. Positions 2-215.

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini2 – 8382GST N-terminal
    Add
    BLAST
    Domaini88 – 215128GST C-terminal
    Add
    BLAST

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni41 – 422Glutathione binding By similarity
    Regioni54 – 552Glutathione binding By similarity
    Regioni67 – 682Glutathione binding By similarity

    Sequence similaritiesi

    Belongs to the GST superfamily. Phi family.

    Phylogenomic databases

    eggNOGiCOG0625.
    HOGENOMiHOG000125746.
    OMAiRAICKYA.

    Family and domain databases

    Gene3Di1.20.1050.10. 1 hit.
    3.40.30.10. 1 hit.
    InterProiIPR010987. Glutathione-S-Trfase_C-like.
    IPR004045. Glutathione_S-Trfase_N.
    IPR004046. GST_C.
    IPR012336. Thioredoxin-like_fold.
    [Graphical view]
    PfamiPF00043. GST_C. 1 hit.
    PF02798. GST_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF47616. SSF47616. 1 hit.
    SSF52833. SSF52833. 1 hit.
    PROSITEiPS50405. GST_CTER. 1 hit.
    PS50404. GST_NTER. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    O82451-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAPMKLYGST LSWNVTRCVA VLEEAGAEYE IVPLDFSKGE HKAPDHLARN    50
    PFGQVPALQD GDLFLWESRA ICKYVCRKNK PELLKDGDLK ESAMVDVWLE 100
    VESNQYTPAL NPILFQCLIR PMMFGAPPDE KVVEENLEKL KKVLEVYEAR 150
    LTKCKYLAGD YISVADLSHV AGTVCLGATP HASVLDAYPH VKAWWTDLMA 200
    RPSSQKVASL MKPPA 215
    Length:215
    Mass (Da):23,977
    Last modified:January 23, 2007 - v3
    Checksum:iF956905A623D07D0
    GO

    Sequence conflict

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti190 – 1901H → Q in CAA05355. 1 Publication

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF062403 mRNA. Translation: AAC64007.1.
    AP003239 Genomic DNA. Translation: BAB63585.1.
    AK058894 mRNA. No translation available.
    AK059818 mRNA. No translation available.
    AK099142 mRNA. No translation available.
    AJ002381 mRNA. Translation: CAA05355.1.
    PIRiT03989.
    RefSeqiNP_001044339.1. NM_001050874.1.
    UniGeneiOs.2241.

    Genome annotation databases

    EnsemblPlantsiOS01T0764000-01; OS01T0764000-01; OS01G0764000.
    OS01T0764000-03; OS01T0764000-03; OS01G0764000.
    GeneIDi4326887.
    KEGGiosa:4326887.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF062403 mRNA. Translation: AAC64007.1 .
    AP003239 Genomic DNA. Translation: BAB63585.1 .
    AK058894 mRNA. No translation available.
    AK059818 mRNA. No translation available.
    AK099142 mRNA. No translation available.
    AJ002381 mRNA. Translation: CAA05355.1 .
    PIRi T03989.
    RefSeqi NP_001044339.1. NM_001050874.1.
    UniGenei Os.2241.

    3D structure databases

    ProteinModelPortali O82451.
    SMRi O82451. Positions 2-215.
    ModBasei Search...

    Proteomic databases

    PaxDbi O82451.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS01T0764000-01 ; OS01T0764000-01 ; OS01G0764000 .
    OS01T0764000-03 ; OS01T0764000-03 ; OS01G0764000 .
    GeneIDi 4326887.
    KEGGi osa:4326887.

    Organism-specific databases

    Gramenei O82451.

    Phylogenomic databases

    eggNOGi COG0625.
    HOGENOMi HOG000125746.
    OMAi RAICKYA.

    Family and domain databases

    Gene3Di 1.20.1050.10. 1 hit.
    3.40.30.10. 1 hit.
    InterProi IPR010987. Glutathione-S-Trfase_C-like.
    IPR004045. Glutathione_S-Trfase_N.
    IPR004046. GST_C.
    IPR012336. Thioredoxin-like_fold.
    [Graphical view ]
    Pfami PF00043. GST_C. 1 hit.
    PF02798. GST_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47616. SSF47616. 1 hit.
    SSF52833. SSF52833. 1 hit.
    PROSITEi PS50405. GST_CTER. 1 hit.
    PS50404. GST_NTER. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    « Hide 'large scale' publications
    1. "Isolation of a full-length cDNA encoding the second glutathione S-transferase from rice (Oryza sativa)."
      Wu J., Cramer C., Hatzios K.K.
      Plant Gene Register PGR98-136
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: cv. Lemont.
      Tissue: Root.
    2. "The genome sequence and structure of rice chromosome 1."
      Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M.
      , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T.
      Nature 420:312-316(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.
    4. "Rice proteome database based on two-dimensional polyacrylamide gel electrophoresis: its status in 2003."
      Komatsu S., Kojima K., Suzuki K., Ozaki K., Higo K.
      Nucleic Acids Res. 32:D388-D392(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: PROTEIN SEQUENCE OF 2-11, TISSUE SPECIFICITY.
      Strain: cv. Nipponbare.
      Tissue: Anther, Callus, Panicle, Root, Sheath and Stem.
    5. "Nucleotide sequence of a cDNA encoding the second glutathione S-transferase from rice (Oryza sativa)."
      Wu J., Cramer C., Hatzios K.K.
      Plant Gene Register PGR98-119
      Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 50-195.
      Strain: cv. Lemont.
    6. "Characterization of two cDNAs encoding glutathione S-transferases in rice and induction of their transcripts by the herbicide safener fenclorim."
      Wu J., Cramer C., Hatzios K.K.
      Physiol. Plantarum 105:102-108(1999)
      Cited for: CHARACTERIZATION, TISSUE SPECIFICITY, INDUCTION.
      Strain: cv. Lemont.
    7. "Organisation and structural evolution of the rice glutathione S-transferase gene family."
      Soranzo N., Sari Gorla M., Mizzi L., De Toma G., Frova C.
      Mol. Genet. Genomics 271:511-521(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NOMENCLATURE, INDUCTION.

    Entry informationi

    Entry nameiGSTF2_ORYSJ
    AccessioniPrimary (citable) accession number: O82451
    Secondary accession number(s): O65858, Q7F5M8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 4, 2005
    Last sequence update: January 23, 2007
    Last modified: May 14, 2014
    This is version 81 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Direct protein sequencing, Reference proteome

    Documents

    1. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3

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