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O82391 (JOSL_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified March 19, 2014. Version 77. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Josephin-like protein

EC=3.4.19.12
Gene names
Ordered Locus Names:At2g29640
ORF Names:T27A16.26
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length360 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

May act as a deubiquitinating enzyme By similarity.

Catalytic activity

Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).

Sequence similarities

Contains 1 Josephin domain.

Ontologies

Keywords
   Biological processUbl conjugation pathway
   LigandNucleotide-binding
   Molecular functionHydrolase
Protease
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processproteolysis

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionnucleotide binding

Inferred from electronic annotation. Source: UniProtKB-KW

omega peptidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 360360Josephin-like protein
PRO_0000053846

Regions

Domain5 – 192188Josephin

Sites

Active site181Nucleophile By similarity
Active site1291Proton acceptor By similarity

Sequences

Sequence LengthMass (Da)Tools
O82391 [UniParc].

Last modified November 1, 1998. Version 1.
Checksum: 01701E35AB2C981D

FASTA36040,489
        10         20         30         40         50         60 
MADSESKIYH ERQRLQFCLL HCLNNLFQDK DAFTKESLNS IAEKLETNDP NKETWTPLSF 

        70         80         90        100        110        120 
VLKPHHNTIT GNYDVNVMIT ALEGKGKSVV WHDKRIGASS IDLDDADTLM GIVLNVPVKR 

       130        140        150        160        170        180 
YGGLWRSRHW VVVRKINGVW YNLDSDLVVP QLFRDDDEVR GFLDQNLSLD VIGLIWNLPY 

       190        200        210        220        230        240 
NANQLPLASN YRVVITHWSD LNGMFSHVTN YPLDFDVYPQ VSSKVSAIYK ATGTKRFNAN 

       250        260        270        280        290        300 
TRPVTPGKQS SVKGPYYKNP GCTTSCGLRL PRKTECTAAR LIKDLSCKFV MGLRLVVMRK 

       310        320        330        340        350        360 
KKKKRSPPLK KASSSGISQP SVISVVNDNN HRSAAIEDCI QFINSSSSFT RSNSTCGSKS 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana."
Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D., Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V., Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S., Cronin L.A. expand/collapse author list , Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.
Nature 402:761-768(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[3]"Structural modeling of ataxin-3 reveals distant homology to adaptins."
Albrecht M., Hoffmann D., Evert B.O., Schmitt I., Wuellner U., Lengauer T.
Proteins 50:355-370(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: 3D-STRUCTURE MODELING.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC005496 Genomic DNA. Translation: AAC35231.1.
CP002685 Genomic DNA. Translation: AEC08284.1.
PIRG84698.
RefSeqNP_180525.1. NM_128518.1.
UniGeneAt.52967.

3D structure databases

ProteinModelPortalO82391.
SMRO82391. Positions 3-190.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING3702.AT2G29640.1-P.

Protein family/group databases

MEROPSC86.A02.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT2G29640.1; AT2G29640.1; AT2G29640.
GeneID817514.
KEGGath:AT2G29640.

Organism-specific databases

TAIRAT2G29640.

Phylogenomic databases

eggNOGNOG321724.
HOGENOMHOG000113135.
InParanoidO82391.
KOK15235.
OMARFNANTR.
PhylomeDBO82391.
ProtClustDBCLSN2913264.

Gene expression databases

GenevestigatorO82391.

Family and domain databases

InterProIPR006155. Josephin.
[Graphical view]
PfamPF02099. Josephin. 1 hit.
[Graphical view]
PROSITEPS50957. JOSEPHIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

PROO82391.

Entry information

Entry nameJOSL_ARATH
AccessionPrimary (citable) accession number: O82391
Entry history
Integrated into UniProtKB/Swiss-Prot: March 25, 2003
Last sequence update: November 1, 1998
Last modified: March 19, 2014
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names