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Protein

Putative F-box/kelch-repeat protein At2g29800

Gene

At2g29800

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Putative F-box/kelch-repeat protein At2g29800
Gene namesi
Ordered Locus Names:At2g29800
ORF Names:T27A16.10
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

TAIRiAT2G29800.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 414414Putative F-box/kelch-repeat protein At2g29800PRO_0000283198Add
BLAST

Proteomic databases

PaxDbiO82376.
PRIDEiO82376.

Expressioni

Gene expression databases

GenevisibleiO82376. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G29800.1.

Structurei

3D structure databases

ProteinModelPortaliO82376.
SMRiO82376. Positions 157-283.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini58 – 10548F-boxAdd
BLAST
Repeati163 – 21149Kelch 1Add
BLAST
Repeati212 – 25847Kelch 2Add
BLAST
Repeati263 – 30240Kelch 3Add
BLAST
Repeati305 – 34945Kelch 4Add
BLAST

Sequence similaritiesi

Contains 1 F-box domain.Curated
Contains 4 Kelch repeats.Curated

Keywords - Domaini

Kelch repeat, Repeat

Phylogenomic databases

eggNOGiKOG1072. Eukaryota.
ENOG4110X8D. LUCA.
HOGENOMiHOG000242515.
InParanoidiO82376.
OMAiDVWCVEV.
PhylomeDBiO82376.

Family and domain databases

Gene3Di2.120.10.80. 1 hit.
InterProiIPR015915. Kelch-typ_b-propeller.
IPR006652. Kelch_1.
[Graphical view]
PfamiPF01344. Kelch_1. 2 hits.
[Graphical view]
SMARTiSM00612. Kelch. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O82376-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASISETSDD GSNGGVPNQK PEEPHKNPQE EKENQNENPN EADEEDDHQD
60 70 80 90 100
EEVENVPPIP RKIPPVLIEN TIAPLRRCHY PKLSLLSNAF RQVISSEDLF
110 120 130 140 150
QVRSLIGSTE PVLYTLITFK YPTFEEGRWF ILQRRNNTSL KLNCVTSLPP
160 170 180 190 200
MFLGCTAVTI GHKIYVVGGY NFRYNKTIST VLEIDCRFNT CRHLRNMKRD
210 220 230 240 250
RCSAVAGVID GRIYVVAGRQ RRFDDWVEVF DVETERWELV PGPFSSFASS
260 270 280 290 300
SGKFIVHVVL DNKIYIMDGD YCFAYDPRRR RWETWGPESA QRSYWHLSSC
310 320 330 340 350
VVDDLLYAIV PREIFGASIV VYDPRGIAWR PVMGLEFWPN LVYFESKMAN
360 370 380 390 400
FGGKLVILGC YRSSFDYYRK DVWCVEVALE KHEDGQIWGK VESLSLVNAF
410
PMSPFFELSR TVTI
Length:414
Mass (Da):47,688
Last modified:November 1, 1998 - v1
Checksum:iDC657A78E6FFC2FC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005496 Genomic DNA. Translation: AAC35221.1.
CP002685 Genomic DNA. Translation: AEC08306.1.
PIRiG84700.
RefSeqiNP_180541.1. NM_128534.2.
UniGeneiAt.66273.

Genome annotation databases

EnsemblPlantsiAT2G29800.1; AT2G29800.1; AT2G29800.
GeneIDi817530.
GrameneiAT2G29800.1; AT2G29800.1; AT2G29800.
KEGGiath:AT2G29800.

Cross-referencesi

Web resourcesi

PlantsUBQ

A functional genomics database for the ubiquitin/26S proteasome proteolytic pathway in plants

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005496 Genomic DNA. Translation: AAC35221.1.
CP002685 Genomic DNA. Translation: AEC08306.1.
PIRiG84700.
RefSeqiNP_180541.1. NM_128534.2.
UniGeneiAt.66273.

3D structure databases

ProteinModelPortaliO82376.
SMRiO82376. Positions 157-283.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT2G29800.1.

Proteomic databases

PaxDbiO82376.
PRIDEiO82376.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G29800.1; AT2G29800.1; AT2G29800.
GeneIDi817530.
GrameneiAT2G29800.1; AT2G29800.1; AT2G29800.
KEGGiath:AT2G29800.

Organism-specific databases

TAIRiAT2G29800.

Phylogenomic databases

eggNOGiKOG1072. Eukaryota.
ENOG4110X8D. LUCA.
HOGENOMiHOG000242515.
InParanoidiO82376.
OMAiDVWCVEV.
PhylomeDBiO82376.

Miscellaneous databases

PROiO82376.

Gene expression databases

GenevisibleiO82376. AT.

Family and domain databases

Gene3Di2.120.10.80. 1 hit.
InterProiIPR015915. Kelch-typ_b-propeller.
IPR006652. Kelch_1.
[Graphical view]
PfamiPF01344. Kelch_1. 2 hits.
[Graphical view]
SMARTiSM00612. Kelch. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.

Entry informationi

Entry nameiFBK38_ARATH
AccessioniPrimary (citable) accession number: O82376
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 3, 2007
Last sequence update: November 1, 1998
Last modified: June 8, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.