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Protein

Putative F-box/kelch-repeat protein At2g29810

Gene

At2g29810

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Putative F-box/kelch-repeat protein At2g29810
Gene namesi
Ordered Locus Names:At2g29810
ORF Names:T27A16.9
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

TAIRiAT2G29810.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 383383Putative F-box/kelch-repeat protein At2g29810PRO_0000283199Add
BLAST

Proteomic databases

PaxDbiO82375.
PRIDEiO82375.

Structurei

3D structure databases

ProteinModelPortaliO82375.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini29 – 7547F-boxAdd
BLAST
Repeati130 – 17748Kelch 1Add
BLAST
Repeati178 – 22346Kelch 2Add
BLAST
Repeati262 – 31352Kelch 3Add
BLAST
Repeati320 – 37152Kelch 4Add
BLAST

Sequence similaritiesi

Contains 1 F-box domain.Curated
Contains 4 Kelch repeats.Curated

Keywords - Domaini

Kelch repeat, Repeat

Phylogenomic databases

eggNOGiKOG1072. Eukaryota.
ENOG4110X8D. LUCA.
HOGENOMiHOG000242515.
InParanoidiO82375.
PhylomeDBiO82375.

Family and domain databases

Gene3Di2.120.10.80. 1 hit.
InterProiIPR015915. Kelch-typ_b-propeller.
IPR006652. Kelch_1.
[Graphical view]
PfamiPF01344. Kelch_1. 2 hits.
[Graphical view]
SMARTiSM00612. Kelch. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

O82375-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVISETSDE GSNGGAANKK PQEEEENIPP IPKELPEELI VIIVALVRRY
60 70 80 90 100
HYPKLSLISK AYRDLISSPE LFQTRSRLGF TEPVLYTSIG FPPFDLPSWY
110 120 130 140 150
ILHRISLQFK QITSLPSMLP GSAVVTIDYK MYVLGGFIGL NQPVSTMIVI
160 170 180 190 200
DCRFHTYREL PSMQRDRGGA AAGVIDGKIY VIGGCKKRYN DWVEVFDVEN
210 220 230 240 250
ESWETVPGPY PNVASESVEF SQYAVMEQKI YILDPLFCLT YEPRKRRFEA
260 270 280 290 300
WGRRSQQRRY ESCCVVNDML CTVDSTCSHG YPIVVYDPKG MVWRPVKGVQ
310 320 330 340 350
SSDLPNLVYY ESRMANFGGK LVILGGNQSR DRKDSYLEKD IWCIEIALEK
360 370 380
REDGDIWGHV ESRSVVLSSS KWPLIALSRS VTV
Length:383
Mass (Da):43,524
Last modified:November 1, 1998 - v1
Checksum:i2988F9E0800EDA0E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005496 Genomic DNA. Translation: AAC35220.1.
CP002685 Genomic DNA. Translation: AEC08307.1.
PIRiH84700.
RefSeqiNP_180542.1. NM_128535.1.
UniGeneiAt.66274.

Genome annotation databases

EnsemblPlantsiAT2G29810.1; AT2G29810.1; AT2G29810.
GeneIDi817531.
GrameneiAT2G29810.1; AT2G29810.1; AT2G29810.
KEGGiath:AT2G29810.

Cross-referencesi

Web resourcesi

PlantsUBQ

A functional genomics database for the ubiquitin/26S proteasome proteolytic pathway in plants

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005496 Genomic DNA. Translation: AAC35220.1.
CP002685 Genomic DNA. Translation: AEC08307.1.
PIRiH84700.
RefSeqiNP_180542.1. NM_128535.1.
UniGeneiAt.66274.

3D structure databases

ProteinModelPortaliO82375.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiO82375.
PRIDEiO82375.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G29810.1; AT2G29810.1; AT2G29810.
GeneIDi817531.
GrameneiAT2G29810.1; AT2G29810.1; AT2G29810.
KEGGiath:AT2G29810.

Organism-specific databases

TAIRiAT2G29810.

Phylogenomic databases

eggNOGiKOG1072. Eukaryota.
ENOG4110X8D. LUCA.
HOGENOMiHOG000242515.
InParanoidiO82375.
PhylomeDBiO82375.

Miscellaneous databases

PROiO82375.

Family and domain databases

Gene3Di2.120.10.80. 1 hit.
InterProiIPR015915. Kelch-typ_b-propeller.
IPR006652. Kelch_1.
[Graphical view]
PfamiPF01344. Kelch_1. 2 hits.
[Graphical view]
SMARTiSM00612. Kelch. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.

Entry informationi

Entry nameiFBK39_ARATH
AccessioniPrimary (citable) accession number: O82375
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 3, 2007
Last sequence update: November 1, 1998
Last modified: February 17, 2016
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.