Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Ethylene-responsive transcription factor CRF5

Gene

CRF5

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Component of the cytokinin signaling pathway involved in cotyledons, leaves, and embryos development. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).By similarity1 Publication

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi98 – 155AP2/ERFPROSITE-ProRule annotationAdd BLAST58

GO - Molecular functioni

  • DNA binding Source: UniProtKB-KW
  • DNA binding transcription factor activity Source: TAIR

GO - Biological processi

  • cotyledon development Source: TAIR
  • cytokinin-activated signaling pathway Source: UniProtKB-KW
  • embryo development ending in seed dormancy Source: TAIR
  • ethylene-activated signaling pathway Source: UniProtKB-KW
  • leaf development Source: TAIR
  • transcription, DNA-templated Source: UniProtKB-KW

Keywordsi

Molecular functionActivator, DNA-binding
Biological processCytokinin signaling pathway, Ethylene signaling pathway, Transcription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
Ethylene-responsive transcription factor CRF5
Alternative name(s):
Protein CYTOKININ RESPONSE FACTOR 5
Gene namesi
Name:CRF5
Synonyms:ERF068
Ordered Locus Names:At2g46310
ORF Names:T3F17.4
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G46310
TAIRilocus:2062954 AT2G46310

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002979201 – 294Ethylene-responsive transcription factor CRF5Add BLAST294

Proteomic databases

PaxDbiO82339

Expressioni

Inductioni

By cytokinins.1 Publication

Gene expression databases

ExpressionAtlasiO82339 baseline and differential
GenevisibleiO82339 AT

Interactioni

Binary interactionsi

Show more details

Protein-protein interaction databases

BioGridi4574, 13 interactors
IntActiO82339, 14 interactors
STRINGi3702.AT2G46310.1

Structurei

3D structure databases

ProteinModelPortaliO82339
SMRiO82339
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG410JT8X Eukaryota
ENOG411082V LUCA
HOGENOMiHOG000237664
InParanoidiO82339
OMAiSHNDETE
OrthoDBiEOG09360QU2
PhylomeDBiO82339

Family and domain databases

CDDicd00018 AP2, 1 hit
Gene3Di3.30.730.10, 1 hit
InterProiView protein in InterPro
IPR001471 AP2/ERF_dom
IPR036955 AP2/ERF_dom_sf
IPR016177 DNA-bd_dom_sf
PfamiView protein in Pfam
PF00847 AP2, 1 hit
PRINTSiPR00367 ETHRSPELEMNT
SMARTiView protein in SMART
SM00380 AP2, 1 hit
SUPFAMiSSF54171 SSF54171, 1 hit
PROSITEiView protein in PROSITE
PS51032 AP2_ERF, 1 hit

Sequencei

Sequence statusi: Complete.

O82339-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKSRVRKSKY TVHRKITSTP FDGFPKIVKI IVTDPCATDS SSDEENDNKS
60 70 80 90 100
VAPRVKRYVD EIRFCDEDDE PKPARKAKKK SPAAAAENGG DLVKSVVKYR
110 120 130 140 150
GVRQRPWGKF AAEIRDPSSR TRLWLGTFAT AEEAAIGYDR AAIRIKGHNA
160 170 180 190 200
QTNFLTPPPS PTTEVLPETP VIDLETVSGC DSARESQISL CSPTSVLRFS
210 220 230 240 250
HNDETEYRTE PTEEQNPFFL PDLFRSGDYF WDSEITPDPL FLDEFHQSLL
260 270 280 290
PNINNNNTVC DKDTNLSDSF PLGVIGDFSS WDVDEFFQDH LLDK
Length:294
Mass (Da):33,156
Last modified:November 1, 1998 - v1
Checksum:i5CBE0C513838C9E1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005397 Genomic DNA Translation: AAC62875.1
CP002685 Genomic DNA Translation: AEC10675.1
AY074638 mRNA Translation: AAL69454.1
BT003121 mRNA Translation: AAO24553.1
AK227661 mRNA Translation: BAE99648.1
PIRiC84901
RefSeqiNP_182154.1, NM_130194.5
UniGeneiAt.37025

Genome annotation databases

EnsemblPlantsiAT2G46310.1; AT2G46310.1; AT2G46310
GeneIDi819239
GrameneiAT2G46310.1; AT2G46310.1; AT2G46310
KEGGiath:AT2G46310

Similar proteinsi

Entry informationi

Entry nameiCRF5_ARATH
AccessioniPrimary (citable) accession number: O82339
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 21, 2007
Last sequence update: November 1, 1998
Last modified: April 25, 2018
This is version 113 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health