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Protein

Protein Brevis radix-like 1

Gene

BRXL1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

May act as a regulator of cell proliferation and elongation in the root.1 Publication

Miscellaneous

Overexpression of BRXL1 can rescue the short root phenotype. However, it does not act redundantly with BRX in vivo, presumably due to a much lower level of expression.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein Brevis radix-like 1
Short name:
AtBRXL1
Gene namesi
Name:BRXL1
Ordered Locus Names:At2g35600
ORF Names:T32F12.2
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G35600.
TAIRilocus:2058694. AT2G35600.

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Nucleus

Pathology & Biotechi

Disruption phenotypei

No visible phenotype.1 Publication

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003738221 – 331Protein Brevis radix-like 1Add BLAST331

Proteomic databases

PaxDbiO82281.

Expressioni

Tissue specificityi

Expressed in roots.1 Publication

Gene expression databases

ExpressionAtlasiO82281. baseline and differential.
GenevisibleiO82281. AT.

Interactioni

Subunit structurei

Heterodimer with BRXL1.

Protein-protein interaction databases

STRINGi3702.AT2G35600.1.

Structurei

3D structure databases

ProteinModelPortaliO82281.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini137 – 192BRX 1PROSITE-ProRule annotationAdd BLAST56
Domaini276 – 331BRX 2PROSITE-ProRule annotationAdd BLAST56

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi61 – 64Poly-Ser4

Sequence similaritiesi

Belongs to the BRX family.Curated

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiENOG410IEZR. Eukaryota.
ENOG410YFJP. LUCA.
HOGENOMiHOG000240563.
InParanoidiO82281.
OMAiSEMESEW.
OrthoDBiEOG09360EZZ.
PhylomeDBiO82281.

Family and domain databases

InterProiView protein in InterPro
IPR013591. Brevis_radix_dom.
IPR027988. BRX_N.
PfamiView protein in Pfam
PF08381. BRX. 2 hits.
PF13713. BRX_N. 1 hit.
PROSITEiView protein in PROSITE
PS51514. BRX. 2 hits.

Sequencei

Sequence statusi: Complete.

O82281-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFTCINCTKM ADRGEEDEED EARGSTTPNT KEAVKSLTTQ IKDMASKFSG
60 70 80 90 100
SHKQSKPTPG SSSSNLRKFP DFDTASESVP YPYPGGSTSS TPAWDLPRSS
110 120 130 140 150
YHQSGRPDSR FTSMYGGERE SISAQSCDVV LEDDEPKEWM AQVEPGVHIT
160 170 180 190 200
FVSLPSGGND LKRIRFSREV FDKWQAQRWW GENYDRIVEL YNVQRFNRQA
210 220 230 240 250
LQTPGRSEDQ SQRDSTYTRI DSARESRDWT QRDNNFRPPG GSVPHHFYGP
260 270 280 290 300
PMDAARITTS SRDEPPSMSN ASEMQGEWVE EDEPGVYITI RQLPDGTREL
310 320 330
RRVRFSRERF GEVHAKTWWE QNRDRIQTQY L
Length:331
Mass (Da):38,005
Last modified:June 1, 2002 - v2
Checksum:i733E036413F98125
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti238P → S in AAM65067 (Ref. 3) Curated1
Sequence conflicti320E → D in AAM65067 (Ref. 3) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005314 Genomic DNA. Translation: AAC36161.2.
AC006068 Genomic DNA. Translation: AAM15118.1.
CP002685 Genomic DNA. Translation: AEC09126.1.
CP002685 Genomic DNA. Translation: ANM61846.1.
CP002685 Genomic DNA. Translation: ANM61847.1.
AY087525 mRNA. Translation: AAM65067.1.
PIRiF84770.
RefSeqiNP_001324041.1. NM_001336562.1.
NP_001324042.1. NM_001336563.1.
NP_565809.1. NM_129113.5.
UniGeneiAt.37646.

Genome annotation databases

EnsemblPlantsiAT2G35600.1; AT2G35600.1; AT2G35600.
AT2G35600.2; AT2G35600.2; AT2G35600.
AT2G35600.3; AT2G35600.3; AT2G35600.
GeneIDi818126.
GrameneiAT2G35600.1; AT2G35600.1; AT2G35600.
AT2G35600.2; AT2G35600.2; AT2G35600.
AT2G35600.3; AT2G35600.3; AT2G35600.
KEGGiath:AT2G35600.

Similar proteinsi

Entry informationi

Entry nameiBRXL1_ARATH
AccessioniPrimary (citable) accession number: O82281
Secondary accession number(s): Q8LAY6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 5, 2009
Last sequence update: June 1, 2002
Last modified: July 5, 2017
This is version 80 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families