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Protein

Putative serine carboxypeptidase-like 23

Gene

SCPL23

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Probable carboxypeptidase.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei178 – 1781By similarity
Active sitei375 – 3751By similarity
Active sitei427 – 4271By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Carboxypeptidase, Hydrolase, Protease

Enzyme and pathway databases

BioCyciARA:AT2G24010-MONOMER.

Protein family/group databases

ESTHERiarath-SCP23. Carboxypeptidase_S10.
MEROPSiS10.A30.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative serine carboxypeptidase-like 23 (EC:3.4.16.-)
Gene namesi
Name:SCPL23
Ordered Locus Names:At2g24010
ORF Names:T29E15.21
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

TAIRiAT2G24010.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2222Sequence analysisAdd
BLAST
Chaini23 – 454432Putative serine carboxypeptidase-like 23PRO_0000274639Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi52 – 521N-linked (GlcNAc...)Sequence analysis
Disulfide bondi85 ↔ 338By similarity
Glycosylationi102 – 1021N-linked (GlcNAc...)Sequence analysis
Glycosylationi136 – 1361N-linked (GlcNAc...)Sequence analysis
Disulfide bondi247 ↔ 258By similarity
Disulfide bondi282 ↔ 306By similarity
Glycosylationi287 – 2871N-linked (GlcNAc...)Sequence analysis
Glycosylationi327 – 3271N-linked (GlcNAc...)Sequence analysis

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PaxDbiO82229.

Expressioni

Tissue specificityi

Expression not detected.

Gene expression databases

GenevisibleiO82229. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G24010.1.

Structurei

3D structure databases

ProteinModelPortaliO82229.
SMRiO82229. Positions 24-451.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the peptidase S10 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiKOG1282. Eukaryota.
COG2939. LUCA.
InParanoidiO82229.
KOiK16297.
PhylomeDBiO82229.

Family and domain databases

Gene3Di3.40.50.1820. 1 hit.
InterProiIPR029058. AB_hydrolase.
IPR001563. Peptidase_S10.
IPR033124. Ser_caboxypep_his_AS.
IPR018202. Ser_caboxypep_ser_AS.
[Graphical view]
PANTHERiPTHR11802. PTHR11802. 1 hit.
PfamiPF00450. Peptidase_S10. 1 hit.
[Graphical view]
PRINTSiPR00724. CRBOXYPTASEC.
SUPFAMiSSF53474. SSF53474. 1 hit.
PROSITEiPS00560. CARBOXYPEPT_SER_HIS. 1 hit.
PS00131. CARBOXYPEPT_SER_SER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O82229-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARIHLIIIL LVISSTSSSS SSLREQEEDM IKALPGQPQV GFSQFSGYVT
60 70 80 90 100
VNESHGRSLF YWLTESPSSS HTKPLLLWLN GGPGCSSIGY GASEEIGPFR
110 120 130 140 150
INKTGSNLYL NKFTWNTEAN ILFLESPAGV GFSYTNTSSD LKDSGDERTA
160 170 180 190 200
QENLIFLIKW MSRFPQYQYR DFYIVGESYA GHYVPQLAKK IHLYNKAFNN
210 220 230 240 250
TPIINLKGFM VGNGDMDKHY DRLGAAMYAW SHAMISDKTY KSILKHCSFT
260 270 280 290 300
ADKTSDKCNW ALYFAYREFG KVNGYSIYSP SCVHQTNQTK FLHGRLLVEE
310 320 330 340 350
YEYDPCTESY AEIYYNRPDV QRAMHANLTS IPYKWTLCNM VVNNNWKDSE
360 370 380 390 400
FSMLPIYKEL TAAGLRIWVF SGDTDAVVPV TGTRLALSKL NLPVKTPWYP
410 420 430 440 450
WYSEKQVGGW TEVYEGLTFA TIRGAGHEVP VLQPERALTL LRSFLAGKEL

PRSY
Length:454
Mass (Da):51,528
Last modified:February 6, 2007 - v2
Checksum:iF15930B2E16B5F4C
GO

Sequence cautioni

The sequence AAC63669.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated
The sequence AEC07517.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated
The sequence AEC07517.1 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005170 Genomic DNA. Translation: AAC63669.1. Different initiation.
CP002685 Genomic DNA. Translation: AEC07517.1. Sequence problems.
PIRiE84631.
RefSeqiNP_179979.4. NM_127963.4.
UniGeneiAt.52888.

Genome annotation databases

EnsemblPlantsiAT2G24010.1; AT2G24010.1; AT2G24010.
GeneIDi816935.
GrameneiAT2G24010.1; AT2G24010.1; AT2G24010.
KEGGiath:AT2G24010.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005170 Genomic DNA. Translation: AAC63669.1. Different initiation.
CP002685 Genomic DNA. Translation: AEC07517.1. Sequence problems.
PIRiE84631.
RefSeqiNP_179979.4. NM_127963.4.
UniGeneiAt.52888.

3D structure databases

ProteinModelPortaliO82229.
SMRiO82229. Positions 24-451.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT2G24010.1.

Protein family/group databases

ESTHERiarath-SCP23. Carboxypeptidase_S10.
MEROPSiS10.A30.

Proteomic databases

PaxDbiO82229.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G24010.1; AT2G24010.1; AT2G24010.
GeneIDi816935.
GrameneiAT2G24010.1; AT2G24010.1; AT2G24010.
KEGGiath:AT2G24010.

Organism-specific databases

TAIRiAT2G24010.

Phylogenomic databases

eggNOGiKOG1282. Eukaryota.
COG2939. LUCA.
InParanoidiO82229.
KOiK16297.
PhylomeDBiO82229.

Enzyme and pathway databases

BioCyciARA:AT2G24010-MONOMER.

Miscellaneous databases

PROiO82229.

Gene expression databases

GenevisibleiO82229. AT.

Family and domain databases

Gene3Di3.40.50.1820. 1 hit.
InterProiIPR029058. AB_hydrolase.
IPR001563. Peptidase_S10.
IPR033124. Ser_caboxypep_his_AS.
IPR018202. Ser_caboxypep_ser_AS.
[Graphical view]
PANTHERiPTHR11802. PTHR11802. 1 hit.
PfamiPF00450. Peptidase_S10. 1 hit.
[Graphical view]
PRINTSiPR00724. CRBOXYPTASEC.
SUPFAMiSSF53474. SSF53474. 1 hit.
PROSITEiPS00560. CARBOXYPEPT_SER_HIS. 1 hit.
PS00131. CARBOXYPEPT_SER_SER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "An expression and bioinformatics analysis of the Arabidopsis serine carboxypeptidase-like gene family."
    Fraser C.M., Rider L.W., Chapple C.
    Plant Physiol. 138:1136-1148(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiSCP23_ARATH
AccessioniPrimary (citable) accession number: O82229
Secondary accession number(s): F4INP1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 6, 2007
Last sequence update: February 6, 2007
Last modified: July 6, 2016
This is version 90 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Peptidase families
    Classification of peptidase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.