O82004 (O82004_SOLLC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: NADP-dependent isocitrate dehydrogenase-like protein EMBL CAA76076.1
Organism	Solanum lycopersicum (Tomato) (Lycopersicon esculentum) EMBL CAA76076.1
Taxonomic identifier	4081 [NCBI]
Taxonomic lineage	cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › asterids › lamiids › Solanales › Solanaceae › Solanoideae › Solaneae › Solanum › Lycopersicon

Protein attributes

Sequence length	393 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the isocitrate and isopropylmalate dehydrogenases family. RuleBase RU004443

Ontologies

Gene Ontology (GO)
Molecular_function	NAD binding Inferred from electronic annotation. Source: InterPro magnesium ion binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	O82004 [UniParc]. Last modified November 1, 1998. Version 1. Checksum: 023B00D064E9AA0F	FASTA	393	43,164
	10 20 30 40 50 60 MPQLVKLPLP FPINGKRTLP ILKHFLTSSS PSPSPSHALT SVRSVTYMPR PGDGTPRAVT 70 80 90 100 110 120 LIPGDGIGPL VTGAVEQVME AMHAPVLLWR YDVHGDMKEY ASGDVDGISN PGRNKVWFKR 130 140 150 160 170 180 EGWKTPVGGG VSSLNVQLRK ELDLYASLVH CFNLKGLPTR HENVDIVVIR ENTEGEYSGL 190 200 210 220 230 240 EHEVVPGVVE SLKVMTKFCS ERIAKYAFEY AYLNNRKVVT AVHKANIMEN LLMVYFWESC 250 260 270 280 290 300 RRDRKQITLG SSTMRELWTT VACNLYQSLS NLMLWSPLIS TEIWLTNTAA GIAGGTGCLC 310 320 330 340 350 360 PGGNVGGDHA VFEQGASAGN VGNEKILEQK KANPIALFLS SAMMLRHLQF PSFADRLETS 370 380 390 VKRVIAEGKY MTKDLGGDCT TQEITDAVIA NLD

References

[1]	"A putative mitochondrial isocitrate dehydrogenase from tomato roots up-regulated during arbuscular mycorrhiza colonization." Tahiri-Alaoui A., Avrova A., Antoniw J.F. Submitted (JAN-1998) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Root EMBL CAA76076.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	Y16126 mRNA. Translation: CAA76076.1.
PIR	T07167.
RefSeq	NP_001234366.1. NM_001247437.1.
UniGene	Les.461.
3D structure databases
HSSP	HSSP built from PDB template 1ISO based on UniProtKB P08200.
ProteinModelPortal	O82004.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	544137.
Family and domain databases
Gene3D	3.40.718.10. 1 hit.
InterPro	IPR001804. Isocitrate/isopropylmalate_DH. IPR024084. IsoPropMal-DH-like_dom. [Graphical view]
PANTHER	PTHR11835. PTHR11835. 1 hit.
Pfam	PF00180. Iso_dh. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

O82004_SOLLC

Accession

Primary (citable) accession number: O82004

Entry history

Integrated into UniProtKB/TrEMBL:	November 1, 1998
Last sequence update:	November 1, 1998
Last modified:	March 6, 2013
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)